RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 GOLGA8RI6L899 631 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 AQP7O14520 342 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 PLIN3O60664 434 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 HCN1O60741 890 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 CDH16O75309 829 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 CLDN14O95500 239 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 PROCP04070 461 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 SHBGP04278 402 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 DRD2P14416 443 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 NAGAP17050 411 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 CSNK2A2P19784 350 aaPredicted RBP11.1□□□□□ -0.63
COPB1-206ENST00000529210 HTR1EP28566 365 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 HMOX2P30519 316 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 SSTR4P31391 388 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 CRHR1P34998 444 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 PTGER4P35408 488 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 CCT5P48643 541 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 TMED10P49755 219 aaKnown RBP11.1□□□□□ -0.63
COPB1-206ENST00000529210 PLGLB1Q02325 96 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 SLC18A2Q05940 514 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 RPS6KA2Q15349 733 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 SGO1Q5FBB7 561 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 EMC4Q5J8M3 183 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 TCHHL1Q5QJ38 904 aaPredicted RBP11.1□□□□□ -0.63
COPB1-206ENST00000529210 TMEM211Q6ICI0 200 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 TRILQ7L0X0 811 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 CD163Q86VB7 1156 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 HOMEZQ8IX15 550 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 GSPT2Q8IYD1 628 aaKnown RBP11.1□□□□□ -0.63
COPB1-206ENST00000529210 SAMD14Q8IZD0 417 aaPredicted RBP11.1□□□□□ -0.63
COPB1-206ENST00000529210 LRRC25Q8N386 305 aaPredicted RBP11.1□□□□□ -0.63
COPB1-206ENST00000529210 VWA5B2Q8N398 1253 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 ZNF675Q8TD23 568 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 METTL2AQ96IZ6 378 aaKnown RBP11.1□□□□□ -0.63
COPB1-206ENST00000529210 ZFP64Q9NPA5 681 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 ACKR4Q9NPB9 350 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 MKS1Q9NXB0 559 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 TUBA8Q9NY65 449 aaPredicted RBP11.1□□□□□ -0.63
COPB1-206ENST00000529210 MAT2BQ9NZL9 334 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 EHD3Q9NZN3 535 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 TBK1Q9UHD2 729 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 CNOT11Q9UKZ1 510 aaKnown RBP11.1□□□□□ -0.63
COPB1-206ENST00000529210 GRID1Q9ULK0 1009 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 PCDHGB3Q9Y5G1 929 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 HRH3Q9Y5N1 445 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 CSMD1Q96PZ7 3565 aa11.1□□□□□ -0.63
COPB1-206ENST00000529210 NPIPB8E9PQR5 432 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 UBFD1O14562 309 aaKnown RBP11.09□□□□□ -0.63
COPB1-206ENST00000529210 BCKDKO14874 412 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 TRIM3O75382 744 aaPredicted RBP11.09□□□□□ -0.63
COPB1-206ENST00000529210 TPOP07202 933 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 MYL2P10916 166 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 GPX3P22352 226 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 GRNP28799 593 aaKnown RBP11.09□□□□□ -0.63
COPB1-206ENST00000529210 DNASE1L1P49184 302 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 HTR6P50406 440 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 RAE1P78406 368 aaKnown RBP11.09□□□□□ -0.63
COPB1-206ENST00000529210 HEPACAMQ14CZ8 416 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 C6orf163Q5TEZ5 329 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 RNF165Q6ZSG1 346 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 FRMD7Q6ZUT3 714 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 TRIM46Q7Z4K8 759 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 OR10G3Q8NGC4 313 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 MARVELD3Q96A59 401 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 CNRIP1Q96F85 164 aaPredicted RBP11.09□□□□□ -0.63
COPB1-206ENST00000529210 GAL3ST4Q96RP7 486 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 HBEGFQ99075 208 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 TREX2Q9BQ50 279 aaPredicted RBP11.09□□□□□ -0.63
COPB1-206ENST00000529210 DEFB127Q9H1M4 99 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 RUBCNLQ9H714 662 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 ZNF703Q9H7S9 590 aaPredicted RBP11.09□□□□□ -0.63
COPB1-206ENST00000529210 ANKZF1Q9H8Y5 726 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 OXSMQ9NWU1 459 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 BOKQ9UMX3 212 aaPredicted RBP11.09□□□□□ -0.63
COPB1-206ENST00000529210 WBP11Q9Y2W2 641 aaKnown RBP11.09□□□□□ -0.63
COPB1-206ENST00000529210 NPFFR2Q9Y5X5 522 aa11.09□□□□□ -0.63
COPB1-206ENST00000529210 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.09□□□□□ -0.63
COPB1-206ENST00000529210 ABCA12Q86UK0 2595 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 LRRC3CA6NJW4 275 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 FAM166BA8MTA8 275 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 TP53I11O14683 189 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 ACOX3O15254 700 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 ZNHIT1O43257 154 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 PCDH7O60245 1069 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 CDC40O60508 579 aaKnown RBP eCLIP11.08□□□□□ -0.64
COPB1-206ENST00000529210 BCAS2O75934 225 aaPredicted RBP11.08□□□□□ -0.64
COPB1-206ENST00000529210 CBX7O95931 251 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 HOXD4P09016 255 aaPredicted RBP11.08□□□□□ -0.64
COPB1-206ENST00000529210 NUDT17P0C025 328 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 CHN1P15882 459 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 NT5EP21589 574 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 TIA1P31483 386 aaKnown RBP eCLIP11.08□□□□□ -0.64
COPB1-206ENST00000529210 DEKP35659 375 aaKnown RBP11.08□□□□□ -0.64
COPB1-206ENST00000529210 PIGAP37287 484 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 MAGEA5P43359 124 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 NR0B1P51843 470 aaKnown RBP11.08□□□□□ -0.64
COPB1-206ENST00000529210 NRG3P56975 720 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 DCAF7P61962 342 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 ACSM2AQ08AH3 577 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 SLC10A1Q14973 349 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms