RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 ZBTB17Q13105 803 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 PRKAA1Q13131 559 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 SGCGQ13326 291 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 SNTA1Q13424 505 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 SF3B4Q15427 424 aaKnown RBP eCLIP5.7□□□□□ -1.5
PCM1-216ENST00000522777 DEFB109BQ30KR1 87 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 KRT39Q6A163 491 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 OR7E24Q6IFN5 339 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 KIAA1161Q6NSJ0 714 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 CAVIN1Q6NZI2 390 aaKnown RBP5.7□□□□□ -1.5
PCM1-216ENST00000522777 PLXDC2Q6UX71 529 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 TMPRSS11FQ6ZWK6 438 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 CREB3L2Q70SY1 520 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 KMT5CQ86Y97 462 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 CTAGE4Q8IX94 777 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 C12orf56Q8IXR9 622 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 LGI2Q8N0V4 545 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 Q8N9G6 341 aaPredicted RBP5.7□□□□□ -1.5
PCM1-216ENST00000522777 GOT1L1Q8NHS2 421 aaPredicted RBP5.7□□□□□ -1.5
PCM1-216ENST00000522777 SCARB1Q8WTV0 552 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 ATL1Q8WXF7 558 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 SLAMF9Q96A28 289 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 CCDC114Q96M63 670 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 GBP5Q96PP8 586 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 SLX1AQ9BQ83 275 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 NEURL2Q9BR09 285 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 LRRC61Q9BV99 259 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 PANK2Q9BZ23 570 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 TCEAL2Q9H3H9 227 aaPredicted RBP5.7□□□□□ -1.5
PCM1-216ENST00000522777 PFDN4Q9NQP4 134 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 CGNQ9P2M7 1197 aaKnown RBP5.7□□□□□ -1.5
PCM1-216ENST00000522777 TP53TG5Q9Y2B4 290 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 RNF215Q9Y6U7 377 aa5.7□□□□□ -1.5
PCM1-216ENST00000522777 TEX13DA0A0J9YY54 714 aaPredicted RBP5.69□□□□□ -1.5
PCM1-216ENST00000522777 MKRN2OSH3BPM6 223 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 TULP2O00295 520 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 XPO1O14980 1071 aaKnown RBP5.69□□□□□ -1.5
PCM1-216ENST00000522777 PPP1R3DO95685 299 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 HLA-DRAP01903 254 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 ALPLP05186 524 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 CTSLP07711 333 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 NGFRP08138 427 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 ALPIP09923 528 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 CCL4P13236 92 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 CTSEP14091 401 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 NR1D1P20393 614 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 MPZP25189 248 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 TLX1P31314 330 aaPredicted RBP5.69□□□□□ -1.5
PCM1-216ENST00000522777 UGT1A3P35503 534 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 PLK1P53350 603 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 PFN3P60673 137 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 CDC20Q12834 499 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 PLA2G7Q13093 441 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 ELOCQ15369 112 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 TPRG1LQ5T0D9 272 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 ARHGAP17Q68EM7 881 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 PLEKHM3Q6ZWE6 761 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 ZSCAN30Q86W11 494 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.69□□□□□ -1.5
PCM1-216ENST00000522777 CCAR2Q8N163 923 aaKnown RBP5.69□□□□□ -1.5
PCM1-216ENST00000522777 IQUBQ8NA54 791 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 SLC4A11Q8NBS3 891 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 GOLGA5Q8TBA6 731 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 ROBO4Q8WZ75 1007 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 SEMA4DQ92854 862 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 DAZLQ92904 295 aaKnown RBP5.69□□□□□ -1.5
PCM1-216ENST00000522777 FAM162AQ96A26 154 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 KIAA1143Q96AT1 154 aaPredicted RBP5.69□□□□□ -1.5
PCM1-216ENST00000522777 PPP1R16AQ96I34 528 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 SLC45A3Q96JT2 553 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 SERPINB11Q96P15 392 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 SEPHS2Q99611 448 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 LMF2Q9BU23 707 aaKnown RBP5.69□□□□□ -1.5
PCM1-216ENST00000522777 GPN2Q9H9Y4 310 aaPredicted RBP5.69□□□□□ -1.5
PCM1-216ENST00000522777 UBTD1Q9HAC8 227 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 GRPEL1Q9HAV7 217 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 APOBEC3GQ9HC16 384 aaKnown RBP5.69□□□□□ -1.5
PCM1-216ENST00000522777 MYNNQ9NPC7 610 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 DONSONQ9NYP3 566 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.69□□□□□ -1.5
PCM1-216ENST00000522777 KIF26BQ2KJY2 2108 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 BSNQ9UPA5 3926 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 LRRK1Q38SD2 2015 aa5.69□□□□□ -1.5
PCM1-216ENST00000522777 FAM170AA1A519 330 aa5.68□□□□□ -1.5
PCM1-216ENST00000522777 IGLON5A6NGN9 336 aa5.68□□□□□ -1.5
PCM1-216ENST00000522777 HNRNPCL2B2RXH8 293 aa5.68□□□□□ -1.5
PCM1-216ENST00000522777 F5H5T6 163 aa5.68□□□□□ -1.5
PCM1-216ENST00000522777 IKBKBO14920 756 aa5.68□□□□□ -1.5
PCM1-216ENST00000522777 DUX1O43812 170 aa5.68□□□□□ -1.5
PCM1-216ENST00000522777 RAD1O60671 282 aa5.68□□□□□ -1.5
PCM1-216ENST00000522777 APOEP02649 317 aa5.68□□□□□ -1.5
PCM1-216ENST00000522777 CDH1P12830 882 aa5.68□□□□□ -1.5
PCM1-216ENST00000522777 GJB2P29033 226 aa5.68□□□□□ -1.5
PCM1-216ENST00000522777 ARCN1P48444 511 aaKnown RBP5.68□□□□□ -1.5
PCM1-216ENST00000522777 DAOAP59103 153 aa5.68□□□□□ -1.5
PCM1-216ENST00000522777 MZT1Q08AG7 82 aa5.68□□□□□ -1.5
PCM1-216ENST00000522777 BST2Q10589 180 aaKnown RBP5.68□□□□□ -1.5
PCM1-216ENST00000522777 C16orf72Q14CZ0 275 aa5.68□□□□□ -1.5
PCM1-216ENST00000522777 KNOP1Q1ED39 458 aaKnown RBP5.68□□□□□ -1.5
PCM1-216ENST00000522777 GOLGA7BQ2TAP0 167 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms