RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 ZBTB9Q96C00 473 aa17.05■□□□□ 0.32
SREK1-207ENST00000520058 CNRIP1Q96F85 164 aaPredicted RBP17.05■□□□□ 0.32
SREK1-207ENST00000520058 TAAR6Q96RI8 345 aa17.05■□□□□ 0.32
SREK1-207ENST00000520058 SLX1AQ9BQ83 275 aa17.05■□□□□ 0.32
SREK1-207ENST00000520058 RAP2CQ9Y3L5 183 aa17.05■□□□□ 0.32
SREK1-207ENST00000520058 CCL27Q9Y4X3 112 aa17.05■□□□□ 0.32
SREK1-207ENST00000520058 EXPH5Q8NEV8 1989 aa17.05■□□□□ 0.32
SREK1-207ENST00000520058 TMEM200CA6NKL6 621 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 TMEM233B4DJY2 109 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 LSM1O15116 133 aaKnown RBP17.04■□□□□ 0.32
SREK1-207ENST00000520058 P04436 131 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 RPL3P39023 403 aaKnown RBP17.04■□□□□ 0.32
SREK1-207ENST00000520058 RPL14P50914 215 aaKnown RBP17.04■□□□□ 0.32
SREK1-207ENST00000520058 DCAF7P61962 342 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 RPP38P78345 283 aaKnown RBP17.04■□□□□ 0.32
SREK1-207ENST00000520058 GTF3C1Q12789 2109 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 MAD2L1Q13257 205 aaPredicted RBP17.04■□□□□ 0.32
SREK1-207ENST00000520058 KIAA0040Q15053 153 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 EBPQ15125 230 aaKnown RBP17.04■□□□□ 0.32
SREK1-207ENST00000520058 UGT3A2Q3SY77 523 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 KRTCAP3Q53RY4 240 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 AGBL2Q5U5Z8 902 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 ATG16L1Q676U5 607 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 FAM71E1Q6IPT2 247 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 C16orf47Q6ZP98 133 aaPredicted RBP17.04■□□□□ 0.32
SREK1-207ENST00000520058 R3HCC1LQ7Z5L2 792 aaKnown RBP17.04■□□□□ 0.32
SREK1-207ENST00000520058 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.04■□□□□ 0.32
SREK1-207ENST00000520058 TICAM1Q8IUC6 712 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 MMP21Q8N119 569 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 PSD4Q8NDX1 1056 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 C17orf47Q8NEP4 570 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 ZNF675Q8TD23 568 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 DOK4Q8TEW6 326 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 TUBB1Q9H4B7 451 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 TAS2R7Q9NYW3 318 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 MAT2BQ9NZL9 334 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 ZDHHC2Q9UIJ5 367 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 PTGDR2Q9Y5Y4 395 aa17.04■□□□□ 0.32
SREK1-207ENST00000520058 NINQ8N4C6 2090 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 ASPDHA6ND91 283 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 ACOT7O00154 380 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 TP53I11O14683 189 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 SKAP2O75563 359 aaPredicted RBP17.03■□□□□ 0.32
SREK1-207ENST00000520058 OR6B1O95007 311 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 ZNF24P17028 368 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 BGNP21810 368 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 PSPHP78330 225 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 ZNF750Q32MQ0 723 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 RFTN2Q52LD8 501 aaPredicted RBP17.03■□□□□ 0.32
SREK1-207ENST00000520058 SLC22A10Q63ZE4 541 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 FAM26EQ8N5C1 309 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 ADCY4Q8NFM4 1077 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 ZFP28Q8NHY6 868 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 TUBGCP3Q96CW5 907 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 MTERF3Q96E29 417 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 SPACA9Q96E40 222 aaPredicted RBP17.03■□□□□ 0.32
SREK1-207ENST00000520058 ZNF681Q96N22 645 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 HES7Q9BYE0 225 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 SACM1LQ9NTJ5 587 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 SEC14L3Q9UDX4 400 aa17.03■□□□□ 0.32
SREK1-207ENST00000520058 EIF3LQ9Y262 564 aaKnown RBP17.03■□□□□ 0.32
SREK1-207ENST00000520058 A0A1W2PS29 197 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 PEX1O43933 1283 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 PEX11AO75192 247 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 CT62P0C5K7 136 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 UQCRFS1P47985 274 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 MEOX1P50221 254 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 NR0B1P51843 470 aaKnown RBP17.02■□□□□ 0.32
SREK1-207ENST00000520058 NCBP2P52298 156 aaKnown RBP eCLIP17.02■□□□□ 0.327e-9■■■■□ 21.1
SREK1-207ENST00000520058 MRPL49Q13405 166 aaKnown RBP17.02■□□□□ 0.32
SREK1-207ENST00000520058 CEBPEQ15744 281 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 GFRALQ6UXV0 394 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 GK5Q6ZS86 529 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 SULF2Q8IWU5 870 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 ZNF615Q8N8J6 731 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 FNDC5Q8NAU1 212 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 OR2T11Q8NH01 316 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 C16orf52Q8NHV5 167 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.02■□□□□ 0.32
SREK1-207ENST00000520058 RAB3IL1Q8TBN0 382 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 MGARPQ8TDB4 240 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 PPCDCQ96CD2 204 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 TLCD1Q96CP7 247 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 PRPF18Q99633 342 aaKnown RBP17.02■□□□□ 0.32
SREK1-207ENST00000520058 REEP4Q9H6H4 257 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 MAPRE3Q9UPY8 281 aa17.02■□□□□ 0.32
SREK1-207ENST00000520058 UBR5O95071 2799 aaPredicted RBP17.01■□□□□ 0.31
SREK1-207ENST00000520058 COQ9O75208 318 aa17.01■□□□□ 0.31
SREK1-207ENST00000520058 LYPLA1O75608 230 aaPredicted RBP17.01■□□□□ 0.31
SREK1-207ENST00000520058 PRPS2P11908 318 aa17.01■□□□□ 0.31
SREK1-207ENST00000520058 SDC1P18827 310 aa17.01■□□□□ 0.31
SREK1-207ENST00000520058 CNR1P21554 472 aa17.01■□□□□ 0.31
SREK1-207ENST00000520058 HPCAL1P37235 193 aa17.01■□□□□ 0.31
SREK1-207ENST00000520058 CASP6P55212 293 aa17.01■□□□□ 0.31
SREK1-207ENST00000520058 PMP22Q01453 160 aa17.01■□□□□ 0.31
SREK1-207ENST00000520058 PLGLB1Q02325 96 aa17.01■□□□□ 0.31
SREK1-207ENST00000520058 MPP2Q14168 576 aa17.01■□□□□ 0.31
SREK1-207ENST00000520058 EXOSC7Q15024 291 aaKnown RBP17.01■□□□□ 0.31
SREK1-207ENST00000520058 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.01■□□□□ 0.31
SREK1-207ENST00000520058 EIF2S3LQ2VIR3 472 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms