RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 CCDC115Q96NT0 180 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 POMT2Q9UKY4 750 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 SAMD4AQ9UPU9 718 aaKnown RBP9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 CCDC88CQ9P219 2028 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 TCRBV3S1A0A5B6 114 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 TNFRSF11BO00300 401 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 PRICKLE3O43900 615 aaPredicted RBP9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 GPIP06744 558 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 TEAD1P28347 426 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 TMEM236Q5W0B7 351 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 DESI1Q6ICB0 168 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 SLC48A1Q6P1K1 146 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 TMEM179BQ7Z7N9 219 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 RIT1Q92963 219 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 EFHD2Q96C19 240 aaPredicted RBP9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 COQ8BQ96D53 544 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 YY1AP1Q9H869 796 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 RPS6KA6Q9UK32 745 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 LRCH1Q9Y2L9 728 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 TMEM184BQ9Y519 407 aaPredicted RBP9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 PCDHGA2Q9Y5H1 932 aa9.17□□□□□ -0.94
EFCAB13-203ENST00000517484 MDC1Q14676 2089 aaKnown RBP9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 A0A0A6YYD5 115 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 MLLT10P55197 1068 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 LSM11P83369 360 aaKnown RBP eCLIP9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 NEDD8Q15843 81 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 ZNF311Q5JNZ3 666 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 CLEC12AQ5QGZ9 265 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 REEP3Q6NUK4 255 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 DGAT2L6Q6ZPD8 337 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 CACTIN-AS1Q8N1I8 211 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 C10orf53Q8N6V4 93 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 ARL10Q8N8L6 244 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 CLDN23Q96B33 292 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 TAMM41Q96BW9 452 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 DGAT2Q96PD7 388 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 TREX2Q9BQ50 279 aaPredicted RBP9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 YIPF3Q9GZM5 350 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 ZBTB20Q9HC78 741 aaPredicted RBP9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 C1GALT1Q9NS00 363 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 CUTCQ9NTM9 273 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 DCAF13Q9NV06 445 aaKnown RBP9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 MRPS33Q9Y291 106 aaKnown RBP9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 SPTAN1Q13813 2472 aaKnown RBP9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 RTTNQ86VV8 2226 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 ALOX12BO75342 701 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 SEMA3DO95025 777 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 UQCRBP14927 111 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 CD1CP29017 333 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 ADRM1Q16186 407 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 INTS11Q5TA45 600 aaKnown RBP9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 TMPRSS9Q7Z410 1059 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 IQCHQ86VS3 1027 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 KRT73Q86Y46 540 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 TMEM102Q8N9M5 508 aaPredicted RBP9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 DTWD2Q8NBA8 298 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 OR52R1Q8NGF1 315 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 OR52N2Q8NGI0 321 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 SCARF2Q96GP6 870 aaPredicted RBP9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 DEPDC7Q96QD5 511 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 WFDC6Q9BQY6 131 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 C9orf16Q9BUW7 83 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 ATP6V1HQ9UI12 483 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 WDR45Q9Y484 360 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 PCNX2A6NKB5 2137 aa9.16□□□□□ -0.94
EFCAB13-203ENST00000517484 PCDH15Q96QU1 1955 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 REM1O75628 298 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 CH25HO95992 272 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 CT62P0C5K7 136 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 CCL4P13236 92 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 RNH1P13489 461 aaKnown RBP9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 ETS2P15036 469 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 ITPKBP27987 946 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 PTPN6P29350 595 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 MPLP40238 635 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 NUDT6P53370 316 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 NDUFAF6Q330K2 333 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 PMS2CLQ68D20 193 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 DCP2Q8IU60 420 aaKnown RBP9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 ELP4Q96EB1 424 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 GFM1Q96RP9 751 aaKnown RBP9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 VNN3Q9NY84 501 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 CTSFQ9UBX1 484 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 SUSD2Q9UGT4 822 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 PCOLCE2Q9UKZ9 415 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 PLCL2Q9UPR0 1127 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 GXYLT2A0PJZ3 443 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 PCDHGA12O60330 932 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 APOL3O95236 402 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 OPN1LWP04000 364 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 IFNW1P05000 195 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 ACADSP16219 412 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 GLB1P16278 677 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 EPHA2P29317 976 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 CSF2RBP32927 897 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 SLC16A1P53985 500 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 RGS8P57771 180 aaPredicted RBP9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 COQ5Q5HYK3 327 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 RNF220Q5VTB9 566 aa9.15□□□□□ -0.94
EFCAB13-203ENST00000517484 HLA-DQA1Q5Y7H0 255 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms