RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 UQCRC2P22695 453 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PPIBP23284 216 aaKnown RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 IL12BP29460 328 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TRPC1P48995 793 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TMED10P49755 219 aaKnown RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CLK3P49761 638 aaKnown RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SSR4P51571 173 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MNAT1P51948 309 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 DGKQP52824 942 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PSMD4P55036 377 aaKnown RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 C21orf58P58505 322 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PSPHP78330 225 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ARG2P78540 354 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 IGLV3-21P80748 117 aaPredicted RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MRPS22P82650 360 aaKnown RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 HPCAP84074 193 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 RHDQ02161 417 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 OC90Q02509 493 aaPredicted RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CHAF1BQ13112 559 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 KLF10Q13118 480 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SRSF6Q13247 344 aaKnown RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ART3Q13508 389 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 RAPSNQ13702 412 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PDE7AQ13946 482 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NFYCQ13952 458 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CYLC2Q14093 348 aaPredicted RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MLC1Q15049 377 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PCOLCEQ15113 449 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MEP1AQ16819 746 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SPRED3Q2MJR0 410 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ZNF750Q32MQ0 723 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CRB2Q5IJ48 1285 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SPANXN4Q5MJ08 99 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 FAM111BQ6SJ93 734 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 OPN5Q6U736 354 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ISLR2Q6UXK2 745 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ZNF551Q7Z340 670 aaPredicted RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CAMKMTQ7Z624 323 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MTDHQ86UE4 582 aaKnown RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ANKRD46Q86W74 232 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 RPS19BP1Q86WX3 136 aaKnown RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 RIMKLAQ8IXN7 391 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ZADH2Q8N4Q0 377 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CPSF7Q8N684 471 aaKnown RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SIRT6Q8N6T7 355 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NUP43Q8NFH3 380 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 OR52R1Q8NGF1 315 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ZNF675Q8TD23 568 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 GPR151Q8TDV0 419 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ADAMTS15Q8TE58 950 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 DOK4Q8TEW6 326 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 THAP3Q8WTV1 239 aaPredicted RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TSPEARQ8WU66 669 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PTPMT1Q8WUK0 201 aaPredicted RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 C10orf82Q8WW14 230 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ASB15Q8WXK1 588 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SLC9A6Q92581 669 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 UCN3Q969E3 161 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TMEM125Q96AQ2 219 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CIDECQ96AQ7 238 aaPredicted RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SPDL1Q96EA4 605 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CNRIP1Q96F85 164 aaPredicted RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SLC35G5Q96KT7 338 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 IMMP1LQ96LU5 166 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CNTNAP3BQ96NU0 1288 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SH3GL1Q99961 368 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TMEM121BQ9BXQ6 578 aaPredicted RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CNTNAP3Q9BZ76 1288 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 OR10A5Q9H207 317 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CDCP1Q9H5V8 836 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 Q9N2J8 555 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MMP25Q9NPA2 562 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 EQTNQ9NQ60 294 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 RYDENQ9NUL5 291 aaKnown RBP5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 EXD2Q9NVH0 621 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 STMN3Q9NZ72 180 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 BTNL2Q9UIR0 455 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CORO2BQ9UQ03 480 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ERVK-11Q9UQG0 969 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ZNF451Q9Y4E5 1061 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 KCNMB2Q9Y691 235 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CFAP54Q96N23 3096 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SPTBN2O15020 2390 aa5.08□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CACNA1AO00555 2505 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SDK2Q58EX2 2172 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 A0A087WV62 115 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 RNF103-CHMP3A0A140T963 221 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 LOC100653049A0A140TA62 436 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 A0A1W2PP18 115 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 DUXAA6NLW8 204 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 BBIP1A8MTZ0 92 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 A8MVJ9 347 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 C5orf58C9J3I9 102 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 C9JVG2 144 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TAF4O00268 1085 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 WWP2O00308 870 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PLOD2O00469 737 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TP53I11O14683 189 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms