RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 FAM71F1Q96KD3 344 aaPredicted RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CNDP1Q96KN2 507 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RPGRIP1Q96KN7 1286 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 EXOC2Q96KP1 924 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FAM210BQ96KR6 192 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MRGPRX4Q96LA9 322 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FAM161BQ96MY7 647 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LGMNQ99538 433 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NUP88Q99567 741 aaPredicted RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TSNAXQ99598 290 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DNAJC7Q99615 494 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MAP3K3Q99759 626 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 APBA2Q99767 749 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CORO1BQ9BR76 489 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TTYH2Q9BSA4 534 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 UPK3BQ9BT76 320 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MTA3Q9BTC8 594 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ALG8Q9BVK2 526 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TM2D2Q9BX73 214 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ERVK-6Q9BXR3 956 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 HDAC8Q9BY41 377 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 POLDIP3Q9BY77 421 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TTTY10Q9BZA0 68 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RAB34Q9BZG1 259 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DNAI2Q9GZS0 605 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CHST5Q9GZS9 411 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CCDC90BQ9GZT6 254 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 WWP1Q9H0M0 922 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 AP5M1Q9H0R1 490 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ASCC2Q9H1I8 757 aaPredicted RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 P2RY12Q9H244 342 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SLC12A5Q9H2X9 1139 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 OR51J1Q9H342 316 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LIME1Q9H400 295 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CCDC86Q9H6F5 360 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RNF167Q9H6Y7 350 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PPP1R3EQ9H7J1 279 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CATSPERBQ9H7T0 1116 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MINDY3Q9H8M7 445 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FKRPQ9H9S5 495 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KIF9Q9HAQ2 790 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 UPF2Q9HAU5 1272 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KCNK13Q9HB14 408 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RAVER2Q9HCJ3 691 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 EPB41L5Q9HCM4 733 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TRIM39Q9HCM9 518 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ABCB6Q9NP58 842 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 AMBNQ9NP70 447 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TREM1Q9NP99 234 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KCNK9Q9NPC2 374 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NLRC4Q9NPP4 1024 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ZNF302Q9NR11 478 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NANSQ9NR45 359 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ARHGEF4Q9NR80 690 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SDR39U1Q9NRG7 319 aaPredicted RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DUSP22Q9NRW4 184 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CISHQ9NSE2 258 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DDX28Q9NUL7 540 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KBTBD4Q9NVX7 518 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NDE1Q9NXR1 346 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ASIC5Q9NY37 505 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TERF2IPQ9NYB0 399 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SMARCAL1Q9NZC9 954 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IL1RAPL1Q9NZN1 696 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 EHD3Q9NZN3 535 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DNAJC27Q9NZQ0 273 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 UPB1Q9UBR1 384 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LPAR3Q9UBY5 353 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TJP2Q9UDY2 1190 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NUFIP1Q9UHK0 495 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DDX25Q9UHL0 483 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DMGDHQ9UI17 866 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LCMT1Q9UIC8 334 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KLHL21Q9UJP4 597 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ZNF222Q9UK12 451 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KLK9Q9UKQ9 250 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FZR1Q9UM11 496 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 AGTPBP1Q9UPW5 1226 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 VDAC3Q9Y277 283 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TP53TG5Q9Y2B4 290 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SLC17A4Q9Y2C5 497 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NEU2Q9Y3R4 380 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MFHAS1Q9Y4C4 1052 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PCDHB5Q9Y5E4 795 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PCDHGB7Q9Y5F8 929 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RBM8AQ9Y5S9 174 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CSADQ9Y600 493 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PSAT1Q9Y617 370 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KIF13BQ9NQT8 1826 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SETD5Q9C0A6 1442 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SBNO1A3KN83 1393 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TDRD9Q8NDG6 1382 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DISP1Q96F81 1524 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 BRCA1P38398 1863 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 AFF2P51816 1311 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PSME4Q14997 1843 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IGLV8-61A0A075B6I0 122 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IGHV3OR16-12A0A075B7B8 117 aa-0.84□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms