RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 CST5P28325 142 aaPredicted RBP10.36□□□□□ -0.75
CPNE4-209ENST00000512055 TARDBPQ13148 414 aaKnown RBP eCLIP10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ABRAXAS2Q15018 415 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 GCNT6Q5T4J0 391 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 AGTRAPQ6RW13 159 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ANKRD13BQ86YJ7 626 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 PNLDC1Q8NA58 520 aaKnown RBP10.36□□□□□ -0.75
CPNE4-209ENST00000512055 CLSTN3Q9BQT9 956 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 GSTO2Q9H4Y5 243 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 PATZ1Q9HBE1 687 aaKnown RBP10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ICKQ9UPZ9 632 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 SBK2P0C263 348 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 H2AFB2P0C5Z0 115 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 EBLN1P0CF75 366 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 NR2C1P13056 603 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ZNF823P16415 610 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 RAB6AP20340 208 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 CD247P20963 164 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 PRPS1L1P21108 318 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 IDSP22304 550 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 GSTM2P28161 218 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 IGFALSP35858 605 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 VEGFCP49767 419 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 DEFB103AP81534 67 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 HNRNPA0Q13151 305 aaKnown RBP10.36□□□□□ -0.75
CPNE4-209ENST00000512055 RAB33AQ14088 237 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 SUSD1Q6UWL2 747 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 FAM109AQ8N4B1 249 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 KRTCAP2Q8N6L1 136 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 OR2AJ1Q8NGZ0 328 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 CCM2Q9BSQ5 444 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 A0A0J9YVX5 310 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ADAM10O14672 748 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 TNFRSF10BO14763 440 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 POP7O75817 140 aaKnown RBP10.36□□□□□ -0.75
CPNE4-209ENST00000512055 PTBP3O95758 552 aaKnown RBP10.36□□□□□ -0.75
CPNE4-209ENST00000512055 PAHP00439 452 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ACP5P13686 325 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 IL7RP16871 459 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ENGP17813 658 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 MS4A2Q01362 244 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 MVKQ03426 396 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 MGAT3Q09327 533 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 DAG1Q14118 895 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ZNF181Q2M3W8 571 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 FBXO43Q4G163 708 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 GALNT13Q8IUC8 556 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 DTX3Q8N9I9 347 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 TMBIM1Q969X1 311 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 SPHK2Q9NRA0 654 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 CNOT11Q9UKZ1 510 aaKnown RBP10.36□□□□□ -0.75
CPNE4-209ENST00000512055 TMEM98Q9Y2Y6 226 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 PCDHGB7Q9Y5F8 929 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 PRORSD1PA6NEY8 169 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 TOR1AO14656 332 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 DIRAS1O95057 198 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 STATHP02808 62 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ARSAP15289 507 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ADRA1AP35348 466 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 HTR6P50406 440 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 NTHL1P78549 312 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 GPR149Q86SP6 731 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 PGBD5Q8N414 524 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 OR5AK3PQ8NH89 298 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 OR5K1Q8NHB7 308 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ZNF347Q96SE7 839 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 TM9SF2Q99805 663 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 MMP27Q9H306 513 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 GPRC5BQ9NZH0 403 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 DNAJB9Q9UBS3 223 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ZNF780BQ9Y6R6 833 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ZNF831Q5JPB2 1677 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ANKRD33BA6NCL7 494 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ARPC5O15511 151 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 RPP14O95059 124 aaKnown RBP10.36□□□□□ -0.75
CPNE4-209ENST00000512055 HLA-DPB1P04440 258 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 PRDX3P30048 256 aaKnown RBP10.36□□□□□ -0.75
CPNE4-209ENST00000512055 GLP1RP43220 463 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 HERV-K104P61576 105 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 RELAQ04206 551 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 EEF1A2Q05639 463 aaKnown RBP10.36□□□□□ -0.75
CPNE4-209ENST00000512055 SEC23BQ15437 767 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 RFTN2Q52LD8 501 aaPredicted RBP10.36□□□□□ -0.75
CPNE4-209ENST00000512055 ERMP1Q7Z2K6 904 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 SPNS2Q8IVW8 549 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 TMEM151AQ8N4L1 468 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 BTBD2Q9BX70 525 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 RBCK1Q9BYM8 510 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 POLR2J3Q9H1A7 115 aaKnown RBP10.36□□□□□ -0.75
CPNE4-209ENST00000512055 CTPS2Q9NRF8 586 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 SERTAD4Q9NUC0 356 aa10.36□□□□□ -0.75
CPNE4-209ENST00000512055 DOCK1Q14185 1865 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 SHOXO15266 292 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 PI15O43692 258 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 ICMTO60725 284 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 OPN1SWP03999 348 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 SRPRAP08240 638 aaKnown RBP10.35□□□□□ -0.75
CPNE4-209ENST00000512055 CBSLP0DN79 551 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 ZNF30P17039 623 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 ENDOUP21128 410 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms