RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 TIA1P31483 386 aaKnown RBP eCLIP12.18□□□□□ -0.468e-8■■■■□ 23.5
HMGB2-205ENST00000511316 LIMS1P48059 325 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 ASAH1Q13510 395 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 GPR50Q13585 617 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 SCARB2Q14108 478 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 NDUFA9Q16795 377 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 TMEM52BQ4KMG9 183 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.18□□□□□ -0.46
HMGB2-205ENST00000511316 PTCHD4Q6ZW05 846 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 B3GNT7Q8NFL0 401 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 OR4A15Q8NGL6 344 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 UTP15Q8TED0 518 aaKnown RBP12.18□□□□□ -0.46
HMGB2-205ENST00000511316 SH3KBP1Q96B97 665 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 SMIM14Q96QK8 99 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 CCM2Q9BSQ5 444 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 SLC17A9Q9BYT1 436 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 REEP4Q9H6H4 257 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 FZD3Q9NPG1 666 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 GPR27Q9NS67 375 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 MS4A12Q9NXJ0 267 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 GPR83Q9NYM4 423 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 TAS2R9Q9NYW1 312 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 SUSD2Q9UGT4 822 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 SLC22A14Q9Y267 594 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 TMEM98Q9Y2Y6 226 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 SNX11Q9Y5W9 270 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 ZNF670-ZNF695F2Z2N8 137 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 FOXE1O00358 373 aaPredicted RBP12.18□□□□□ -0.46
HMGB2-205ENST00000511316 TSPAN6O43657 245 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 MMP20O60882 483 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 SLCO2B1O94956 709 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 GADD45GO95257 159 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 PTHP01270 115 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 IL1AP01583 271 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 IFNW1P05000 195 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 LAMP1P11279 417 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 GNSP15586 552 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 CBLP22681 906 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 XCR1P46094 333 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 CRISP1P54107 249 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 SEMG2Q02383 582 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 ZNF763Q0D2J5 394 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 SF3B4Q15427 424 aaKnown RBP eCLIP12.18□□□□□ -0.463e-8■■■■□ 23.6
HMGB2-205ENST00000511316 SHBQ15464 509 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 HLA-BQ31612 363 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 ZNF362Q5T0B9 420 aaPredicted RBP12.18□□□□□ -0.46
HMGB2-205ENST00000511316 BRAT1Q6PJG6 821 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 HSDL2Q6YN16 418 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 RABEPKQ7Z6M1 372 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 ATCAYQ86WG3 371 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 TAGAPQ8N103 731 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 FAM181AQ8N9Y4 354 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 FBXO15Q8NCQ5 510 aaPredicted RBP12.18□□□□□ -0.46
HMGB2-205ENST00000511316 PROKR2Q8NFJ6 384 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 OR10Q1Q8NGQ4 319 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 ASB12Q8WXK4 309 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 UBE2E3Q969T4 207 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 EGLN2Q96KS0 407 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 FOPNLQ96NB1 174 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 DEPDC7Q96QD5 511 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 RHNO1Q9BSD3 238 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 EFCAB11Q9BUY7 163 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 EDEM2Q9BV94 578 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 OR51E2Q9H255 320 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 ISYNA1Q9NPH2 558 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 TMCC3Q9ULS5 477 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 SNX7Q9UNH6 387 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 SSR3Q9UNL2 185 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 A0A0U1RQS6 177 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 POM121BA6NF01 834 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 SEC14L5O43304 696 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 PCDH8O95206 1070 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 VIPP01282 170 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 CYP2A6P11509 494 aaPredicted RBP12.17□□□□□ -0.46
HMGB2-205ENST00000511316 CD59P13987 128 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 IDSP22304 550 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 CD38P28907 300 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 GTF2E2P29084 291 aaKnown RBP12.17□□□□□ -0.46
HMGB2-205ENST00000511316 MMP12P39900 470 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 CRATP43155 626 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 CDH12P55289 794 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 PFN3P60673 137 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 RPS21P63220 83 aaKnown RBP12.17□□□□□ -0.46
HMGB2-205ENST00000511316 CDK6Q00534 326 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 IFITM2Q01629 132 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 HSPA14Q0VDF9 509 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 MLLT11Q13015 90 aaPredicted RBP12.17□□□□□ -0.46
HMGB2-205ENST00000511316 CDK10Q15131 360 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 MED22Q15528 200 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 EXOC3L2Q2M3D2 409 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 SLC25A30Q5SVS4 291 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 PRAMEF14Q5SWL7 426 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 TIGD3Q6B0B8 471 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 CRTC1Q6UUV9 634 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 ABI3BPQ7Z7G0 1075 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 THOC6Q86W42 341 aaKnown RBP12.17□□□□□ -0.46
HMGB2-205ENST00000511316 FAM83FQ8NEG4 500 aaPredicted RBP12.17□□□□□ -0.46
HMGB2-205ENST00000511316 WDR36Q8NI36 951 aaKnown RBP12.17□□□□□ -0.46
HMGB2-205ENST00000511316 TMEM80Q96HE8 168 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 CENPOQ9BU64 300 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms