RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 NPIPB13A6NJU9 1138 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 NPIPB4C9JG80 1138 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 NPIPA7E9PJI5 369 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 POC1B-GALNT4F8VUJ3 575 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 H3BQF6 201 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 ANKRD28O15084 1053 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 PAPSS1O43252 624 aaPredicted RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 CCDC22O60826 627 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 USP12O75317 370 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 TAF5LO75529 589 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 SEC14L2O76054 403 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 NDUFA10O95299 355 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 IGHV2-70P01814 119 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 FBP1P09467 338 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 NPIPA8P0DM63 369 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 RNH1P13489 461 aaKnown RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 UGT1A6P19224 532 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 GLRA1P23415 457 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 AKT2P31751 481 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 PTGER4P35408 488 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 BTDP43251 543 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 RFX5P48382 616 aaPredicted RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 MTHFSP49914 203 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 RAB9AP51151 201 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 SLC5A3P53794 718 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 PTTG1IPP53801 180 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 MFAP4P55083 255 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 CDH15P55291 814 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 TMEM33P57088 247 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 RBX1P62877 108 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 TXNL4AP83876 142 aaKnown RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 CHRNB3Q05901 458 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 ZFP36L1Q07352 338 aaKnown RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 ITGADQ13349 1161 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 PTGR1Q14914 329 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 GSTA3Q16772 222 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 GUK1Q16774 197 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 EXOC3L4Q17RC7 722 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 DEFB115Q30KQ5 88 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 C18orf21Q32NC0 220 aaPredicted RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 AMZ1Q400G9 498 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 TRIM60Q495X7 471 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 GAGE13Q4V321 117 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 MIDNQ504T8 468 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 SLC35F1Q5T1Q4 408 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 UBAP2Q5T6F2 1119 aaKnown RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 FAM91A1Q658Y4 838 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 NCR3LG1Q68D85 454 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 TIGD3Q6B0B8 471 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 CYB5R2Q6BCY4 276 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 RPL13AP3Q6NVV1 102 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 VSTM1Q6UX27 236 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 CD300LGQ6UXG3 332 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 LRRN1Q6UXK5 716 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 PAQR9Q6ZVX9 377 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 ABI3BPQ7Z7G0 1075 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 LUZP2Q86TE4 346 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 SLC26A11Q86WA9 606 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 TDRPQ86YL5 185 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 CCDC71Q8IV32 467 aaPredicted RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 FAM71AQ8IYT1 594 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 MREGQ8N565 214 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 UXS1Q8NBZ7 420 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 DNAAF1Q8NEP3 725 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 OR4D6Q8NGJ1 314 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 OR52B4Q8NGK2 314 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 GRPEL2Q8TAA5 225 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 TBC1D15Q8TC07 691 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 MAGEE2Q8TD90 523 aaPredicted RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 GIPC3Q8TF64 312 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 DNASE1L2Q92874 299 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 GCDHQ92947 438 aaPredicted RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 SLCO2A1Q92959 643 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 KAT5Q92993 513 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 P2RX5Q93086 422 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 PSMG2Q969U7 264 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 MIB2Q96AX9 1013 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 C3orf49Q96BT1 292 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 ELP4Q96EB1 424 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 C16orf58Q96GQ5 468 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 NSL1Q96IY1 281 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 CLPTM1LQ96KA5 538 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 GAD1Q99259 594 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 PAFAH2Q99487 392 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 CDCA3Q99618 268 aaPredicted RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 OMDQ99983 421 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 INPP5KQ9BT40 448 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 ALG12Q9BV10 488 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 TMED9Q9BVK6 235 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 SLC38A1Q9H2H9 487 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 SLCO5A1Q9H2Y9 848 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 TTYH1Q9H313 450 aaPredicted RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 NARFLQ9H6Q4 476 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 ZMAT4Q9H898 229 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 CD209Q9NNX6 404 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 GPR27Q9NS67 375 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 SDHAF2Q9NX18 166 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 NLGN3Q9NZ94 848 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 ADA2Q9NZK5 511 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms