RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 MAT2BQ9NZL9 334 aa11.79□□□□□ -0.52
NR1I3-225ENST00000508387 ADAM29Q9UKF5 820 aa11.79□□□□□ -0.52
NR1I3-225ENST00000508387 SNX6Q9UNH7 406 aa11.79□□□□□ -0.52
NR1I3-225ENST00000508387 RNF6Q9Y252 685 aa11.79□□□□□ -0.52
NR1I3-225ENST00000508387 FAM215AQ9Y5M1 114 aa11.79□□□□□ -0.52
NR1I3-225ENST00000508387 ZNF407Q9C0G0 2248 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 OR6C76A6NM76 312 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 UBFD1O14562 309 aaKnown RBP11.78□□□□□ -0.52
NR1I3-225ENST00000508387 IL3P08700 152 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 COX6B1P14854 86 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 TAC1P20366 129 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 ATP5F1P24539 256 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-225ENST00000508387 GALNSP34059 522 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 TRPC1P48995 793 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 PRKAA2P54646 552 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 KRTAP10-9P60411 292 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 MRPS35P82673 323 aaKnown RBP11.78□□□□□ -0.52
NR1I3-225ENST00000508387 NTRK2Q16620 822 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 PRSS53Q2L4Q9 553 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 HYAL4Q2M3T9 481 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 PRICKLE4Q2TBC4 344 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 GXYLT1Q4G148 440 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 ZNF585AQ6P3V2 769 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 GPRIN3Q6ZVF9 776 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 PAGE2Q7Z2X7 111 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 EPS8L3Q8TE67 593 aaKnown RBP11.78□□□□□ -0.52
NR1I3-225ENST00000508387 KLHL29Q96CT2 875 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 CNRIP1Q96F85 164 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-225ENST00000508387 ITPAQ9BY32 194 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 NXF5Q9H1B4 397 aaKnown RBP11.78□□□□□ -0.52
NR1I3-225ENST00000508387 TP63Q9H3D4 680 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-225ENST00000508387 BRF2Q9HAW0 419 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.78□□□□□ -0.52
NR1I3-225ENST00000508387 EHD3Q9NZN3 535 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 PDZD2O15018 2839 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 APCP25054 2843 aa11.78□□□□□ -0.52
NR1I3-225ENST00000508387 CACNA1CQ13936 2221 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 A0A1B0GVC2 190 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 C1orf226A1L170 272 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 G3V2L1 256 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 CBX7O95931 251 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 PORP16435 677 aaPredicted RBP11.77□□□□□ -0.53
NR1I3-225ENST00000508387 PCSK2P16519 638 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 IMPDH1P20839 514 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 WNT3P56703 355 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 BTKQ06187 659 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 PMPCAQ10713 525 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 BIKQ13323 160 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 RASA2Q15283 850 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 LGSNQ5TDP6 509 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 FNDC7Q5VTL7 733 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 SH2D5Q6ZV89 423 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 VWA5B2Q8N398 1253 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 SLC15A4Q8N697 577 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 MYRIPQ8NFW9 859 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 CA5BP1Q8WTZ4 195 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 CHTF18Q8WVB6 975 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 DIO2Q92813 273 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 L3HYPDHQ96EM0 354 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 ZNF681Q96N22 645 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 DOHHQ9BU89 302 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 LDAHQ9H6V9 325 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 CHST11Q9NPF2 352 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 NPDC1Q9NQX5 325 aaPredicted RBP11.77□□□□□ -0.53
NR1I3-225ENST00000508387 AHSPQ9NZD4 102 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 VPS29Q9UBQ0 182 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 PLLPQ9Y342 182 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 NPFFR2Q9Y5X5 522 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 KIAA1549Q9HCM3 1950 aa11.77□□□□□ -0.53
NR1I3-225ENST00000508387 PHF3Q92576 2039 aaKnown RBP11.77□□□□□ -0.53
NR1I3-225ENST00000508387 HCFC1P51610 2035 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 TRGV5A0A0B4J1U4 118 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 AQP7O14520 342 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 PCDH7O60245 1069 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 TRIM3O75382 744 aaPredicted RBP11.76□□□□□ -0.53
NR1I3-225ENST00000508387 PROCP04070 461 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 ABCD3P28288 659 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 SERPINB3P29508 390 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 HMOX2P30519 316 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 ADH7P40394 386 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 MAN2A2P49641 1150 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 TFF3Q07654 80 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 CSTF3Q12996 717 aaKnown RBP11.76□□□□□ -0.53
NR1I3-225ENST00000508387 LCP2Q13094 533 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 RPS6KA2Q15349 733 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 TRMT12Q53H54 448 aaKnown RBP11.76□□□□□ -0.53
NR1I3-225ENST00000508387 C10orf62Q5T681 223 aaPredicted RBP11.76□□□□□ -0.53
NR1I3-225ENST00000508387 RGS9BPQ6ZS82 235 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 GDF7Q7Z4P5 450 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 LRRC25Q8N386 305 aaPredicted RBP11.76□□□□□ -0.53
NR1I3-225ENST00000508387 CCNYL1Q8N7R7 359 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 OR52R1Q8NGF1 315 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 OR9A2Q8NGT5 310 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 METTL6Q8TCB7 284 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 SPPL2AQ8TCT8 520 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 UBLCP1Q8WVY7 318 aaPredicted RBP11.76□□□□□ -0.53
NR1I3-225ENST00000508387 EXOSC8Q96B26 276 aaKnown RBP11.76□□□□□ -0.53
NR1I3-225ENST00000508387 RILPQ96NA2 401 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 SHCBP1LQ9BZQ2 653 aa11.76□□□□□ -0.53
NR1I3-225ENST00000508387 EXO5Q9H790 373 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms