RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 IFT88Q13099 833 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 C1orf185Q5T7R7 199 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 WLSQ5T9L3 541 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 BICRALQ6AI39 1079 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 TTC19Q6DKK2 380 aaPredicted RBP11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 LETMD1Q6P1Q0 360 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 COMMD6Q7Z4G1 85 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 CDH24Q86UP0 819 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 DMRTC2Q8IXT2 367 aaPredicted RBP11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 MMP21Q8N119 569 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 OR10Q1Q8NGQ4 319 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 ZNF483Q8TF39 744 aaPredicted RBP11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 IFT81Q8WYA0 676 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 DIO2Q92813 273 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 ADIPOR1Q96A54 375 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 TP53INP1Q96A56 240 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 ZNF597Q96LX8 424 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 JSRP1Q96MG2 331 aaPredicted RBP11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 C1QTNF3Q9BXJ4 246 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 OR10A5Q9H207 317 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 ELOVL6Q9H5J4 265 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 EXO5Q9H790 373 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 ACKR4Q9NPB9 350 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 FARSBQ9NSD9 589 aaKnown RBP11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 B4GALT7Q9UBV7 327 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 Q9UFV3 132 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 ZNF225Q9UK10 706 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 DTX4Q9Y2E6 619 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 IKBKGQ9Y6K9 419 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 SETD2Q9BYW2 2564 aaPredicted RBP11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 MED13LQ71F56 2210 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 POC1B-GALNT4F8VUJ3 575 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 OTCP00480 354 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 PDYNP01213 254 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 HOXD4P09016 255 aaPredicted RBP11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 S1PR1P21453 382 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 GPX3P22352 226 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 ZFP36L2P47974 494 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 XKP51811 444 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 MAPK12P53778 367 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 TESK1Q15569 626 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 SGO1Q5FBB7 561 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 TBCELQ5QJ74 424 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 CCNYL2Q5T2Q4 361 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 FNDC7Q5VTL7 733 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 SLC48A1Q6P1K1 146 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 PAGE2Q7Z2X7 111 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 MILR1Q7Z6M3 343 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 LIX1LQ8IVB5 337 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 C17orf47Q8NEP4 570 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 MYRIPQ8NFW9 859 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 OR4K14Q8NGD5 310 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 UHMK1Q8TAS1 419 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 SPPL2AQ8TCT8 520 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 UBQLN3Q9H347 655 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 AHSPQ9NZD4 102 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 TRPS1Q9UHF7 1281 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 CES1P1Q9UKY3 287 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 SLC12A4Q9UP95 1085 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 PCDHGB3Q9Y5G1 929 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 NPFFR2Q9Y5X5 522 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 MED12Q93074 2177 aa11.93□□□□□ -0.5
HMGCS1-205ENST00000508319 KIAA1549Q9HCM3 1950 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 ZFHX3Q15911 3703 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 A0A087WUV0 522 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 C1orf226A1L170 272 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 TP53I11O14683 189 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 GABRA1P14867 456 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 PORP16435 677 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 TSPAN8P19075 237 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 GDF1P27539 372 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 ABCD3P28288 659 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 GCAP28676 217 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 SOX18P35713 384 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 TRPC1P48995 793 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 TMED10P49755 219 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 CDH13P55290 713 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 DUSP2Q05923 314 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 CRYZQ08257 329 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 MGAT2Q10469 447 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 DUSP8Q13202 625 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 C6orf163Q5TEZ5 329 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 HLA-DQA1Q5Y7H0 255 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 SEM1Q6ZVN7 128 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 ULK2Q8IYT8 1036 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 VWA5B2Q8N398 1253 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 OR7G1Q8NGA0 311 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 TRPC4APQ8TEL6 797 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 NTNG2Q96CW9 530 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 RILPQ96NA2 401 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 SECISBP2Q96T21 854 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 HBEGFQ99075 208 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 BRF2Q9HAW0 419 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 MAT2BQ9NZL9 334 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 KCNN3Q9UGI6 736 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 ITGB1BP2Q9UKP3 347 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 PCDHA9Q9Y5H5 950 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 ITPR3Q14573 2671 aa11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 MAP1AP78559 2803 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-205ENST00000508319 EXOC1LA0A1B0GW35 172 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms