RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 LRRC37AA6NMS7 1700 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 DICER1Q9UPY3 1922 aaKnown RBP2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 hCG_38984A0A1B0GV85 526 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 TMEM89A2RUT3 159 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 P2RX6O15547 441 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 GRID2O43424 1007 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 LRP3O75074 770 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 SCGB2A1O75556 95 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 BBOX1O75936 387 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 NADKO95544 446 aaPredicted RBP2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 DIRAS3O95661 229 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 FGF19O95750 216 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 PROS1P07225 676 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 HMBSP08397 361 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 ERVK-10P10266 1014 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 GNSP15586 552 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 FUT1P19526 365 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 GIFP27352 417 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 PRDX6P30041 224 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 HLA-FP30511 346 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 SOX3P41225 446 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 ACAA2P42765 397 aaKnown RBP2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 MAGEA4P43358 317 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 CCL11P51671 97 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 PHEXP78562 749 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 GABPB1Q06547 395 aaPredicted RBP2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 MFGE8Q08431 387 aaPredicted RBP2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 HSPA14Q0VDF9 509 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 PDZK1IP1Q13113 114 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 SNX1Q13596 522 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 MEF2DQ14814 521 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 EFTUD2Q15029 972 aaKnown RBP eCLIP2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 WDR43Q15061 677 aaKnown RBP eCLIP2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 RBBP5Q15291 538 aaKnown RBP2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 OR1C1Q15619 314 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZRSR1Q15695 479 aaKnown RBP2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 C3AR1Q16581 482 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 GPAT3Q53EU6 434 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 HSP90AB3PQ58FF7 597 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 IL23RQ5VWK5 629 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 RTL6Q6ICC9 239 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 CAPN13Q6MZZ7 669 aaPredicted RBP2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 AFTPHQ6ULP2 937 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 FAM159AQ6UWV7 190 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 ADGRD2Q7Z7M1 963 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 C17orf64Q86WR6 236 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 LACC1Q8IV20 430 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 LRRC17Q8N6Y2 441 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 TMEM178AQ8NBL3 297 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 OR5AP2Q8NGF4 316 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 OR10V1Q8NGI7 309 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 MAPK15Q8TD08 544 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 DQX1Q8TE96 717 aaKnown RBP2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 GATAD1Q8WUU5 269 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 MRPL53Q96EL3 112 aaKnown RBP2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 C2orf48Q96LS8 159 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 ERGIC2Q96RQ1 377 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 CBWD1Q9BRT8 395 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 FUCA2Q9BTY2 467 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 NMNAT2Q9BZQ4 307 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 SLC26A1Q9H2B4 701 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 ECT2Q9H8V3 914 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 C3orf14Q9HBI5 128 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 SLC35D1Q9NTN3 355 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 CGNQ9P2M7 1197 aaKnown RBP2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 CDHR2Q9BYE9 1310 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 SSC5DA1L4H1 1573 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 DDX60Q8IY21 1712 aaKnown RBP2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 LAMB2P55268 1798 aa2.82□□□□□ -1.96
TRAPPC11-205ENST00000506426 IGHV4-4A0A075B6R2 117 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 IGKV2D-30A0A075B6S6 120 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 F8WDY8 70 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 SLCO1B7G3V0H7 640 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 BMPR1BO00238 502 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 ARPC1BO15143 372 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 CLDN3O15551 220 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 LMX1BO60663 402 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 KHDRBS3O75525 346 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 AK1P00568 194 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 LYNP07948 512 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 CEACAM1P13688 526 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 NCF1P14598 390 aaPredicted RBP2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 GPX3P22352 226 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 CCKARP32238 428 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 MAP2K2P36507 400 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 MDH1P40925 334 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 ACADSBP45954 432 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 XGP55808 180 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 BTG1P62324 171 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 CSNK2BP67870 215 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 RPL36AP83881 106 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 CDKL1Q00532 357 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 MYBPC1Q00872 1141 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 NME3Q13232 169 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 BTG3Q14201 252 aaPredicted RBP2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 PDIA5Q14554 519 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 EXOSC7Q15024 291 aaKnown RBP2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 TAB1Q15750 504 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZNF718Q3SXZ3 478 aa2.81□□□□□ -1.96
TRAPPC11-205ENST00000506426 ANKDD1AQ495B1 522 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms