RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 ELAC2Q9BQ52 826 aaKnown RBP9.36□□□□□ -0.91
NUP54-203ENST00000504173 WDR77Q9BQA1 342 aaPredicted RBP9.36□□□□□ -0.91
NUP54-203ENST00000504173 TUBB6Q9BUF5 446 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 BRINP2Q9C0B6 783 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 ZNF160Q9HCG1 818 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 ATAD3AQ9NVI7 634 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 TAS2R7Q9NYW3 318 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 ATP6V1HQ9UI12 483 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 TRIM33Q9UPN9 1127 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 GPR45Q9Y5Y3 372 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 CLCA3PQ9Y6N3 262 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 MED13LQ71F56 2210 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 CSMD2Q7Z408 3487 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 MASP2O00187 686 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 ANKRD28O15084 1053 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 LAMP1P11279 417 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 NCF2P19878 526 aaPredicted RBP9.35□□□□□ -0.91
NUP54-203ENST00000504173 MPIP34949 423 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 PGDP52209 483 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 NCBP2P52298 156 aaKnown RBP eCLIP9.35□□□□□ -0.91
NUP54-203ENST00000504173 SLC26A5P58743 744 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 UFM1P61960 85 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 DUSP2Q05923 314 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 CHAF1BQ13112 559 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 SQLEQ14534 574 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 TERF2Q15554 542 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 PRSS53Q2L4Q9 553 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 BTBD16Q32M84 506 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 PGS1Q32NB8 556 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 CROCCQ5TZA2 2017 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 CPZQ66K79 652 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 GALNT12Q8IXK2 581 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 RIMKLAQ8IXN7 391 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 CCDC116Q8IYX3 515 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 MIER2Q8N344 545 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 TMEM102Q8N9M5 508 aaPredicted RBP9.35□□□□□ -0.91
NUP54-203ENST00000504173 CLEC1AQ8NC01 280 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 ZFP28Q8NHY6 868 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 C9orf43Q8TAL5 461 aaPredicted RBP9.35□□□□□ -0.91
NUP54-203ENST00000504173 DOK4Q8TEW6 326 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 PTPMT1Q8WUK0 201 aaPredicted RBP9.35□□□□□ -0.91
NUP54-203ENST00000504173 NUDT8Q8WV74 236 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 C10orf82Q8WW14 230 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 PCSK5Q92824 1860 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 RIT1Q92963 219 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 CIDECQ96AQ7 238 aaPredicted RBP9.35□□□□□ -0.91
NUP54-203ENST00000504173 ZNF681Q96N22 645 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 DUSP26Q9BV47 211 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 CNPPD1Q9BV87 410 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 RABEP2Q9H5N1 569 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 ATP13A2Q9NQ11 1180 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 SDR39U1Q9NRG7 319 aaPredicted RBP9.35□□□□□ -0.91
NUP54-203ENST00000504173 ZIM2Q9NZV7 527 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 ADAM21Q9UKJ8 722 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 HIVEP3Q5T1R4 2406 aa9.35□□□□□ -0.91
NUP54-203ENST00000504173 MYO1GB0I1T2 1018 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 C9JVG2 144 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 SLC22A3O75751 556 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 ATP1B1P05026 303 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 CELA2AP08217 269 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 ICAM2P13598 275 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 EFNA1P20827 205 aaPredicted RBP9.34□□□□□ -0.91
NUP54-203ENST00000504173 GNLYP22749 145 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 ITGA3P26006 1051 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 S100A3P33764 101 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 GALNSP34059 522 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 PTGER1P34995 402 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 KIR3DL1P43629 444 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 ATP4BP51164 291 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 AP2B1P63010 937 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 IRX1P78414 480 aaPredicted RBP9.34□□□□□ -0.91
NUP54-203ENST00000504173 SRSF11Q05519 484 aaKnown RBP9.34□□□□□ -0.91
NUP54-203ENST00000504173 KLRB1Q12918 225 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 AIMP2Q13155 320 aaKnown RBP9.34□□□□□ -0.91
NUP54-203ENST00000504173 ZNF267Q14586 743 aaPredicted RBP9.34□□□□□ -0.91
NUP54-203ENST00000504173 LTB4RQ15722 352 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 CEBPEQ15744 281 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 MPEG1Q2M385 716 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 SPRED3Q2MJR0 410 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 DPY19L1Q2PZI1 675 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 IRAK1BP1Q5VVH5 260 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 METTL21CQ5VZV1 264 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 PLAG1Q6DJT9 500 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 PAOXQ6QHF9 649 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 DGAT2L6Q6ZPD8 337 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 CAMKMTQ7Z624 323 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 KBTBD2Q8IY47 623 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 NATD1Q8N6N6 113 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 GLB1L3Q8NCI6 653 aaPredicted RBP9.34□□□□□ -0.91
NUP54-203ENST00000504173 MORN4Q8NDC4 146 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 B3GNT7Q8NFL0 401 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 ADCY4Q8NFM4 1077 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 OR9A2Q8NGT5 310 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 SLC2A12Q8TD20 617 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 TESCQ96BS2 214 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 COQ8BQ96D53 544 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 ZBED6CLQ96FA7 236 aaPredicted RBP9.34□□□□□ -0.91
NUP54-203ENST00000504173 VMP1Q96GC9 406 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 ART5Q96L15 291 aa9.34□□□□□ -0.91
NUP54-203ENST00000504173 TEX37Q96LM6 180 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms