RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 RILPQ96NA2 401 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 GNRHR2Q96P88 292 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 PPP1R2P1Q96PQ5 205 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 C19orf43Q9BQ61 176 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 SFXN3Q9BWM7 321 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 SORBS1Q9BX66 1292 aaKnown RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 ERVK-6Q9BXR3 956 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 KLHL4Q9C0H6 718 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 PRDM14Q9GZV8 571 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 NAT10Q9H0A0 1025 aaKnown RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 EHD1Q9H4M9 534 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 MANSC1Q9H8J5 431 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 COPS7BQ9H9Q2 264 aaPredicted RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 GALNT9Q9HCQ5 603 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 SERHLQ9NQF3 203 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 TREX1Q9NSU2 369 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 TEX10Q9NXF1 929 aaPredicted RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 JKAMPQ9P055 326 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 COPS7AQ9UBW8 275 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 ZNF629Q9UEG4 869 aaPredicted RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 CDC42EP3Q9UKI2 254 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 PACSIN3Q9UKS6 424 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 IKZF3Q9UKT9 509 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 LAMP3Q9UQV4 416 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 ERVK-19Q9WJR5 959 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 C15orf41Q9Y2V0 281 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.29□□□□□ -1.88
USP46-205ENST00000504078 MMACHCQ9Y4U1 282 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.29□□□□□ -1.88
USP46-205ENST00000504078 MAGED1Q9Y5V3 778 aaPredicted RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 COMMD10Q9Y6G5 202 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 CHCHD2Q9Y6H1 151 aaPredicted RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 CLCA3PQ9Y6N3 262 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 SPACA6W5XKT8 324 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 COL6A5A8TX70 2615 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 SONP18583 2426 aaKnown RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 EXPH5Q8NEV8 1989 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 TLN2Q9Y4G6 2542 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 DSCAMO60469 2012 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 HEATR5AQ86XA9 2040 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 KCNE1BA0A087WTH5 132 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 UQCRHLA0A096LP55 91 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 SYCE3A1L190 88 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 GRID2IPA4D2P6 1211 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 NCF1BA6NI72 391 aaPredicted RBP3.28□□□□□ -1.88
USP46-205ENST00000504078 CD8B2A6NJW9 211 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 NCF1CA8MVU1 366 aaPredicted RBP3.28□□□□□ -1.88
USP46-205ENST00000504078 AHRRA9YTQ3 701 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 H0YC42 278 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 GOLGA8MH3BSY2 632 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 PLOD2O00469 737 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 UBFD1O14562 309 aaKnown RBP3.28□□□□□ -1.88
USP46-205ENST00000504078 CLGNO14967 610 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 SEC14L5O43304 696 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 LIASO43766 372 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 B3GALT2O43825 422 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 ZBTB14O43829 449 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 GMFGO60234 142 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 FGF17O60258 216 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 BANF1O75531 89 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 TNFSF13O75888 250 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 SOX30O94993 753 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 TJP3O95049 919 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 IGHV4-39P01824 125 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 THBDP07204 575 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 MPC1LP0DKB6 136 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 NCF1P14598 390 aaPredicted RBP3.28□□□□□ -1.88
USP46-205ENST00000504078 POU2F1P14859 743 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 OGNP20774 298 aaKnown RBP3.28□□□□□ -1.88
USP46-205ENST00000504078 IL10P22301 178 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 IGFBP5P24593 272 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 PTPN7P35236 360 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 TIMP3P35625 211 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 HSD17B2P37059 387 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 FDFT1P37268 417 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 MAGEA1P43355 309 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 RPL21P46778 160 aaKnown RBP3.28□□□□□ -1.88
USP46-205ENST00000504078 CDK9P50750 372 aaKnown RBP3.28□□□□□ -1.88
USP46-205ENST00000504078 TPD52P55327 224 aaPredicted RBP3.28□□□□□ -1.88
USP46-205ENST00000504078 LIM2P55344 173 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 RWDD2BP57060 319 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 RPS4XP62701 263 aaKnown RBP3.28□□□□□ -1.88
USP46-205ENST00000504078 SKP1P63208 163 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 ZNF844Q08AG5 666 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 STX4Q12846 297 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 GPS1Q13098 491 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 ZNF460Q14592 562 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 TERF2Q15554 542 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 TRIP13Q15645 432 aaPredicted RBP3.28□□□□□ -1.88
USP46-205ENST00000504078 HYAL4Q2M3T9 481 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 ZNF791Q3KP31 576 aaPredicted RBP3.28□□□□□ -1.88
USP46-205ENST00000504078 BBS9Q3SYG4 887 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 PCID2Q5JVF3 399 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 FNDC7Q5VTL7 733 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 ANKRD22Q5VYY1 191 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 FAM219BQ5XKK7 198 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 SLC22A10Q63ZE4 541 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 MRNIPQ6NTE8 343 aa3.28□□□□□ -1.88
USP46-205ENST00000504078 ADAM5Q6NVV9 412 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms