RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SLC5A8Q8N695 610 aa20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 CSNK1A1LQ8N752 337 aa20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 OR52J3Q8NH60 311 aa20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 BBS10Q8TAM1 723 aa20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 PROX1Q92786 737 aa20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 ZNF354BQ96LW1 612 aa20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 ADNPQ9H2P0 1102 aa20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 FAM60AQ9NP50 221 aa20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 SEC14L3Q9UDX4 400 aa20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 FFAR1O14842 300 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 ASNA1O43681 348 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 CHRM4P08173 479 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 ANXA8P13928 327 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 FOSL2P15408 326 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 FUT4P22083 530 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 OLR1P78380 273 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 SIM1P81133 766 aaPredicted RBP20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 CDK5R2Q13319 367 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 TOP3AQ13472 1001 aaPredicted RBP20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 PRAMEF8Q5VWM4 474 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 PRAMEF7Q5VXH5 474 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 Q7L0L9 218 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 LMX1AQ8TE12 382 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 KAT2AQ92830 837 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 OTUB1Q96FW1 271 aaPredicted RBP20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 IL21RQ9HBE5 538 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 GMPPBQ9Y5P6 360 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 COMMD3-BMI1R4GMX3 469 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 NINQ8N4C6 2090 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 CEP192Q8TEP8 1941 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 ZNF860A6NHJ4 632 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 GALR3O60755 368 aaPredicted RBP20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 UBXN7O94888 489 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 ETS2P15036 469 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 AGXTP21549 392 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 VSX2P58304 361 aaPredicted RBP20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 GABARAPL2P60520 117 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 GNA13Q14344 377 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 C17orf82Q86X59 251 aaPredicted RBP20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 KRT73Q86Y46 540 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 ZNF566Q969W8 418 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 OR7D2Q96RA2 312 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 ANKRA2Q9H9E1 313 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 TBC1D17Q9HA65 648 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 RLIMQ9NVW2 624 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 KCNE3Q9Y6H6 103 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 TMEM131Q92545 1883 aa20.06■□□□□ 0.8
UBE2D3-216ENST00000503742 PCDH17O14917 1159 aa20.05■□□□□ 0.8
UBE2D3-216ENST00000503742 SEMA7AO75326 666 aa20.05■□□□□ 0.8
UBE2D3-216ENST00000503742 GADD45GO95257 159 aa20.05■□□□□ 0.8
UBE2D3-216ENST00000503742 GANABQ14697 944 aaKnown RBP20.05■□□□□ 0.8
UBE2D3-216ENST00000503742 ZBED5Q49AG3 693 aa20.05■□□□□ 0.8
UBE2D3-216ENST00000503742 TCTN3Q6NUS6 607 aa20.05■□□□□ 0.8
UBE2D3-216ENST00000503742 GPR153Q6NV75 609 aa20.05■□□□□ 0.8
UBE2D3-216ENST00000503742 TSPYL5Q86VY4 417 aaPredicted RBP20.05■□□□□ 0.8
UBE2D3-216ENST00000503742 TMEFF1Q8IYR6 380 aa20.05■□□□□ 0.8
UBE2D3-216ENST00000503742 ARHGEF39Q8N4T4 335 aa20.05■□□□□ 0.8
UBE2D3-216ENST00000503742 C19orf47Q8N9M1 422 aaKnown RBP20.05■□□□□ 0.8
UBE2D3-216ENST00000503742 OR7G2Q8NG99 324 aa20.05■□□□□ 0.8
UBE2D3-216ENST00000503742 OR4D11Q8NGI4 311 aa20.05■□□□□ 0.8
UBE2D3-216ENST00000503742 BTBD2Q9BX70 525 aa20.05■□□□□ 0.8
UBE2D3-216ENST00000503742 A0A0G2JPF8 293 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 HNRNPCL2B2RXH8 293 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 HNRNPCL3B7ZW38 293 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 CYR61O00622 381 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 HNRNPCL4P0DMR1 293 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 IL5RAQ01344 420 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 KLHL35Q6PF15 583 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 KCTD8Q6ZWB6 473 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 OLIG3Q7RTU3 272 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 ABCA7Q8IZY2 2146 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 DHRS1Q96LJ7 313 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 HSPA12BQ96MM6 686 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 APOL4Q9BPW4 351 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 ACTRT3Q9BYD9 372 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 MIR1-1HGQ9H1L0 117 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 BLOC1S6Q9UL45 172 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 NAALAD2Q9Y3Q0 740 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 ARRDC5A6NEK1 342 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 LILRA5A6NI73 299 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 SLC1A7O00341 560 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 CCDC159P0C7I6 412 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 CDH3P22223 829 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 EEF1B2P24534 225 aaKnown RBP20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 SOX18P35713 384 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 NXPH1P58417 271 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 ESRRGP62508 458 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 RPP38P78345 283 aaKnown RBP20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 ZP2Q05996 745 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 BROXQ5VW32 411 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 COMTD1Q86VU5 262 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 CCDC71Q8IV32 467 aaPredicted RBP20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 OR4N5Q8IXE1 308 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 SHISA5Q8N114 240 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 CNIH3Q8TBE1 160 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 NMD3Q96D46 503 aaKnown RBP20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 HRASLS5Q96KN8 279 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 GUCD1Q96NT3 240 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 CCDC3Q9BQI4 270 aa20.04■□□□□ 0.8
UBE2D3-216ENST00000503742 WFDC6Q9BQY6 131 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms