RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 CHST10O43529 356 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 GPR75O95800 540 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 FESP07332 822 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 POLR2IP36954 125 aaKnown RBP12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 MLLT3P42568 568 aaPredicted RBP12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 XCR1P46094 333 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 ZNF628Q5EBL2 1059 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 COMTD1Q86VU5 262 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 METTL25Q8N6Q8 603 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 DOK4Q8TEW6 326 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 ANKRD9Q96BM1 317 aaPredicted RBP12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 ZDHHC12Q96GR4 267 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 MUS81Q96NY9 551 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 COL21A1Q96P44 957 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 WFDC6Q9BQY6 131 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 CHRNA10Q9GZZ6 450 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 BCL2L10Q9HD36 194 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 DDX18Q9NVP1 670 aaKnown RBP12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 PILRBQ9UKJ0 227 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 PLCL2Q9UPR0 1127 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 PCDHGB3Q9Y5G1 929 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 LYVE1Q9Y5Y7 322 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 GPC6Q9Y625 555 aaPredicted RBP12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 SPACA6W5XKT8 324 aa12.83□□□□□ -0.36
SPTBN1-205ENST00000496323 SEMA7AO75326 666 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 PDE9AO76083 593 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 ATP1B1P05026 303 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 GLB1P16278 677 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 KCNJ5P48544 419 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 RAB38P57729 211 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 KCNAB2Q13303 367 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 TRMT12Q53H54 448 aaKnown RBP12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 FHL5Q5TD97 284 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 KDM4DQ6B0I6 523 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 MFSD12Q6NUT3 480 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 OR4C15Q8NGM1 316 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 GAB3Q8WWW8 586 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 TANKQ92844 425 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 ZNF347Q96SE7 839 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 FSCN3Q9NQT6 498 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 SOHLH2Q9NX45 425 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 TMEM9Q9P0T7 183 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 TMEM247A6NEH6 219 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 DNAJB5O75953 348 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 GNSP15586 552 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 ARRB1P49407 418 aaPredicted RBP12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 ARHGDIAP52565 204 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 CRISP3P54108 245 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 CSTF1Q05048 431 aaKnown RBP12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 APOFQ13790 326 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 KCNAB1Q14722 419 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 AMZ1Q400G9 498 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 PLK5Q496M5 336 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 FAHD1Q6P587 224 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 KANSL1Q7Z3B3 1105 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 GALNT5Q7Z7M9 940 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 HMGN2P46Q86SG4 172 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 ZNF605Q86T29 641 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 Q8N9G6 341 aaPredicted RBP12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 TTC29Q8NA56 475 aaPredicted RBP12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 OR4D11Q8NGI4 311 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 SLC35A4Q96G79 324 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 ZNF607Q96SK3 696 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 CD180Q99467 661 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 ACTRT3Q9BYD9 372 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 SPRTNQ9H040 489 aaPredicted RBP12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 PDE7BQ9NP56 450 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 HCN3Q9P1Z3 774 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 C3orf18Q9UK00 162 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 CLCA2Q9UQC9 943 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 ENPP4Q9Y6X5 453 aa12.82□□□□□ -0.36
SPTBN1-205ENST00000496323 HYKKA2RU49 373 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 TNFRSF11BO00300 401 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 FFAR1O14842 300 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 ADAMDEC1O15204 470 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 LAMTOR5O43504 91 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 HRO43593 1189 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 ASNA1O43681 348 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 SEC24DO94855 1032 aaPredicted RBP12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 ZBTB11O95625 1053 aaPredicted RBP12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 LINGO3P0C6S8 592 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 ITGA2P17301 1181 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 IGFBP5P24593 272 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 CSF2RBP32927 897 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 ANXA11P50995 505 aaKnown RBP12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 KCNC4Q03721 635 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 MGAT2Q10469 447 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 FAM53BQ14153 422 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 NR1D2Q14995 579 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 FOXB2Q5VYV0 432 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 GATAD2AQ86YP4 633 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 SLC16A11Q8NCK7 471 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 OR52J3Q8NH60 311 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 EDAQ92838 391 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 RMND5BQ96G75 393 aaPredicted RBP12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 AHCYL2Q96HN2 611 aaKnown RBP12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 MS4A4EQ96PG1 132 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 PIP5K1AQ99755 562 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 RBCK1Q9BYM8 510 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 EXD2Q9NVH0 621 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms