RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CXXC4Q9H2H0 198 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 UBQLN3Q9H347 655 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 ADAM29Q9UKF5 820 aa21.29■■□□□ 1
COL27A1-208ENST00000494780 ANKHD1Q8IWZ3 2542 aaKnown RBP21.29■■□□□ 1
COL27A1-208ENST00000494780 OR7A17O14581 309 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 TRAPPC6AO75865 159 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 CT62P0C5K7 136 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 BMP5P22003 454 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 TIMP3P35625 211 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 ARL1P40616 181 aaPredicted RBP21.28■■□□□ 1
COL27A1-208ENST00000494780 MASP1P48740 699 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 CDK9P50750 372 aaKnown RBP21.28■■□□□ 1
COL27A1-208ENST00000494780 CCNG1P51959 295 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 UAP1Q16222 522 aaPredicted RBP21.28■■□□□ 1
COL27A1-208ENST00000494780 FBXL19-AS1Q494R0 122 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 C6orf163Q5TEZ5 329 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 FRG2Q64ET8 278 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 BICRALQ6AI39 1079 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 PTGR2Q8N8N7 351 aaPredicted RBP21.28■■□□□ 1
COL27A1-208ENST00000494780 NAXEQ8NCW5 288 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 TNIP2Q8NFZ5 429 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 OR7G1Q8NGA0 311 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 OR52B6Q8NGF0 335 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 CDK15Q96Q40 435 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 FRG2BQ96QU4 278 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 SH3GL2Q99962 352 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 NTMT1Q9BV86 223 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 PRDM14Q9GZV8 571 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 VPS11Q9H270 941 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 RASSF1Q9NS23 344 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 ZNF358Q9NW07 568 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 AHSPQ9NZD4 102 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 CRIM1Q9NZV1 1036 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 ZNF629Q9UEG4 869 aaPredicted RBP21.28■■□□□ 1
COL27A1-208ENST00000494780 TMCO1Q9UM00 188 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 C15orf41Q9Y2V0 281 aa21.28■■□□□ 1
COL27A1-208ENST00000494780 FAM221AA4D161 298 aa21.27■■□□□ 1
COL27A1-208ENST00000494780 CPMP14384 443 aa21.27■■□□□ 1
COL27A1-208ENST00000494780 PHBP35232 272 aa21.27■■□□□ 1
COL27A1-208ENST00000494780 CASP3P42574 277 aa21.27■■□□□ 1
COL27A1-208ENST00000494780 XKP51811 444 aa21.27■■□□□ 1
COL27A1-208ENST00000494780 SNTB1Q13884 538 aaKnown RBP21.27■■□□□ 1
COL27A1-208ENST00000494780 FNDC7Q5VTL7 733 aa21.27■■□□□ 1
COL27A1-208ENST00000494780 VASNQ6EMK4 673 aa21.27■■□□□ 1
COL27A1-208ENST00000494780 PAGE2Q7Z2X7 111 aa21.27■■□□□ 1
COL27A1-208ENST00000494780 ZNF572Q7Z3I7 529 aaPredicted RBP21.27■■□□□ 1
COL27A1-208ENST00000494780 RNASE6Q93091 150 aaKnown RBP21.27■■□□□ 1
COL27A1-208ENST00000494780 GPATCH1Q9BRR8 931 aaKnown RBP21.27■■□□□ 1
COL27A1-208ENST00000494780 MTRF1LQ9UGC7 380 aaKnown RBP21.27■■□□□ 1
COL27A1-208ENST00000494780 FOXD3Q9UJU5 478 aaPredicted RBP21.27■■□□□ 1
COL27A1-208ENST00000494780 ITPR3Q14573 2671 aa21.27■■□□□ 1
COL27A1-208ENST00000494780 CDH16O75309 829 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 ACSL3O95573 720 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 IL2RAP01589 272 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 KLK1P06870 262 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 RBP1P09455 135 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 PORP16435 677 aaPredicted RBP21.26■□□□□ 0.99
COL27A1-208ENST00000494780 NT5EP21589 574 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 FLYWCH1Q4VC44 716 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 NHSL2Q5HYW2 709 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 CCNYL2Q5T2Q4 361 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 TTC19Q6DKK2 380 aaPredicted RBP21.26■□□□□ 0.99
COL27A1-208ENST00000494780 PLD6Q8N2A8 252 aaKnown RBP21.26■□□□□ 0.99
COL27A1-208ENST00000494780 CHDHQ8NE62 594 aaPredicted RBP21.26■□□□□ 0.99
COL27A1-208ENST00000494780 FAM222BQ8WU58 562 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 PHF21BQ96EK2 531 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 HSPBAP1Q96EW2 488 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 TMEM41AQ96HV5 264 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 TMUB1Q9BVT8 246 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 CLEC4MQ9H2X3 399 aaPredicted RBP21.26■□□□□ 0.99
COL27A1-208ENST00000494780 ACSS3Q9H6R3 686 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 ZDHHC18Q9NUE0 388 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 ST6GALNAC2Q9UJ37 374 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 EDARQ9UNE0 448 aa21.26■□□□□ 0.99
COL27A1-208ENST00000494780 FREM3P0C091 2139 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 KDM4EB2RXH2 506 aaPredicted RBP21.25■□□□□ 0.99
COL27A1-208ENST00000494780 STX16-NPEPL1H3BU86 382 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 STX16O14662 325 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 GUCY1B2O75343 617 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 CD99P14209 185 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 NAGAP17050 411 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 KRT15P19012 456 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 IFT88Q13099 833 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 TRAF3Q13114 568 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 NSUN5P2Q63ZY6 315 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 POMZP3Q6PJE2 187 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 PRR22Q8IZ63 422 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 NTNG2Q96CW9 530 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 GNRHR2Q96P88 292 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 MRPL1Q9BYD6 325 aaKnown RBP21.25■□□□□ 0.99
COL27A1-208ENST00000494780 CCM2LQ9NUG4 571 aaPredicted RBP21.25■□□□□ 0.99
COL27A1-208ENST00000494780 PCTPQ9UKL6 214 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 CFL2Q9Y281 166 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 SLC6A5Q9Y345 797 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 ZFHX3Q15911 3703 aa21.25■□□□□ 0.99
COL27A1-208ENST00000494780 ESYT3A0FGR9 886 aa21.24■□□□□ 0.99
COL27A1-208ENST00000494780 A6NNC1 897 aa21.24■□□□□ 0.99
COL27A1-208ENST00000494780 ABCB1P08183 1280 aaPredicted RBP21.24■□□□□ 0.99
COL27A1-208ENST00000494780 S1PR1P21453 382 aa21.24■□□□□ 0.99
COL27A1-208ENST00000494780 GPX3P22352 226 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms