RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 TGM5O43548 720 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 NDUFS6O75380 124 aaKnown RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 GCM2O75603 506 aaPredicted RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 RPP40O75818 363 aaKnown RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 AP2A2O94973 939 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 IFNA10P01566 189 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ATXN1LP0C7T5 689 aaKnown RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 CXCL8P10145 99 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 IFNGR1P15260 489 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 HPGDP15428 266 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 PTAFRP25105 342 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 HTR6P50406 440 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 WDR5P61964 334 aaKnown RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 RAB40BQ12829 278 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 IL18Q14116 193 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 TMEM132DQ14C87 1099 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 TMEM132BQ14DG7 1078 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 NR6A1Q15406 480 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 OLFML2AQ68BL7 652 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 CASP12Q6UXS9 341 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 PHACTR4Q8IZ21 702 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 TEX19Q8NA77 164 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 PXT1Q8NFP0 134 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 GOT1L1Q8NHS2 421 aaPredicted RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 CD99L2Q8TCZ2 262 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ACER1Q8TDN7 264 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 GNPDA2Q8TDQ7 276 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 UPF1Q92900 1129 aaKnown RBP eCLIP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 MALSU1Q96EH3 234 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 OR4K3Q96R72 315 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 GFM1Q96RP9 751 aaKnown RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 DMRTA2Q96SC8 542 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 MYOCQ99972 504 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 NIPSNAP1Q9BPW8 284 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 BTBD1Q9H0C5 482 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 DUSP15Q9H1R2 295 aaPredicted RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 TMPRSS4Q9NRS4 437 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 RNF146Q9NTX7 359 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ZFP57Q9NU63 452 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 MARCH4Q9P2E8 410 aaPredicted RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ERVK-19Q9WJR5 959 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ANXA2P2A6NMY6 339 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ZBTB42B2RXF5 422 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 L7N2F9 121 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 RFXANKO14593 260 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 SGCEO43556 437 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 LZTS3O60299 673 aaPredicted RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 PRAMEF2O60811 474 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ENTPD6O75354 484 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 STX11O75558 287 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 IGHV2-5P01817 119 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 HLA-DQB2P05538 268 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 SERPIND1P05546 499 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 MMP2P08253 660 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 EBLN1P0CF75 366 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 HAPLN1P10915 354 aaPredicted RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 OSMP13725 252 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 SMPD1P17405 629 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 MAS1LP35410 378 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 MNDAP41218 407 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 PITPNBP48739 271 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 STAT5BP51692 787 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 SEC61A1P61619 476 aaKnown RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 MLLT1Q03111 559 aaPredicted RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 LAPTM4AQ15012 233 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ABRAXAS2Q15018 415 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 SLC10A6Q3KNW5 377 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 CRB2Q5IJ48 1285 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 RAET1GQ6H3X3 334 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 OVOS1Q6IE37 1185 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ZNF425Q6IV72 752 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 Q6ZPB1 254 aaPredicted RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 DNM1P46Q6ZS02 220 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 GOLGA7Q7Z5G4 137 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 LAPTM4BQ86VI4 370 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ANGPTL5Q86XS5 388 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 LGI4Q8N135 537 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 REPS2Q8NFH8 660 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 OR52I1Q8NGK6 324 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 OR2T35Q8NGX2 323 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 SPATA22Q8NHS9 363 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 APOBEC4Q8WW27 367 aaKnown RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ELP4Q96EB1 424 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 MTERF1Q99551 399 aaKnown RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ENKD1Q9H0I2 346 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ABCG5Q9H222 651 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 TMEM38AQ9H6F2 299 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ACER3Q9NUN7 267 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 NUDT15Q9NV35 164 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 RPS6KB2Q9UBS0 482 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 SPATA2Q9UM82 520 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 EDARQ9UNE0 448 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 PTCH2Q9Y6C5 1203 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 KIF26AQ9ULI4 1882 aaPredicted RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 TNS1Q9HBL0 1735 aaKnown RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 SUV39H1O43463 412 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ONECUT3O60422 494 aaPredicted RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 STAG3L1P0CL83 205 aa4.55□□□□□ -1.68
PRKD3-210ENST00000494667 MUC1P15941 1255 aaPredicted RBP4.55□□□□□ -1.68
PRKD3-210ENST00000494667 ELK1P19419 428 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms