RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ALDOCP09972 364 aaKnown RBP6.53□□□□□ -1.36
VPS13B-205ENST00000493587 G6PDP11413 515 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 DRD5P21918 477 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 NFYAP23511 347 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-205ENST00000493587 MIPP30301 263 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 PTPN7P35236 360 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 SLC19A1P41440 591 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 AVPR1BP47901 424 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 CAV3P56539 151 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 BTG1P62324 171 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 UBE2IP63279 158 aaKnown RBP6.53□□□□□ -1.36
VPS13B-205ENST00000493587 FOXM1Q08050 763 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 ECH1Q13011 328 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 MTMR1Q13613 665 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 GPR176Q14439 515 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 GLYR1Q49A26 553 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-205ENST00000493587 C22orf42Q6IC83 251 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 Q6ZPB1 254 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-205ENST00000493587 PHF13Q86YI8 300 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-205ENST00000493587 KLBQ86Z14 1044 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 CCNYQ8ND76 341 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 MCPH1Q8NEM0 835 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 OR10A6Q8NH74 314 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 GGHQ92820 318 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 MED8Q96G25 268 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 MRPL57Q9BQC6 102 aaKnown RBP6.53□□□□□ -1.36
VPS13B-205ENST00000493587 YIPF4Q9BSR8 244 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 MEAF6Q9HAF1 191 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 ASCL3Q9NQ33 180 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 SERHLQ9NQF3 203 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 MED9Q9NWA0 146 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 USP18Q9UMW8 372 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 CFAP20Q9Y6A4 193 aaKnown RBP6.53□□□□□ -1.36
VPS13B-205ENST00000493587 CDH10Q9Y6N8 788 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 SOWAHBA6NEL2 793 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 UBE2CO00762 179 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 PRSS23O95084 383 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 DIRAS3O95661 229 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 ADH1AP07327 375 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 SAGP10523 405 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-205ENST00000493587 GABRB1P18505 474 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 GALNSP34059 522 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 OR2B8PP59922 312 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 RAB8AP61006 207 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 IKZF1Q13422 519 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 KEAP1Q14145 624 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 TSNQ15631 228 aaKnown RBP6.53□□□□□ -1.36
VPS13B-205ENST00000493587 TMEM35AQ53FP2 167 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 RAB12Q6IQ22 244 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 GSG1LQ6UXU4 331 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 HSDL2Q6YN16 418 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 MSANTD1Q6ZTZ1 278 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF367Q7RTV3 350 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 ZDHHC21Q8IVQ6 265 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 UBAC2Q8NBM4 344 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 SPATA22Q8NHS9 363 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 CNOT9Q92600 299 aaKnown RBP6.53□□□□□ -1.36
VPS13B-205ENST00000493587 RFKQ969G6 155 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 MS4A4EQ96PG1 132 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 MIXL1Q9H2W2 232 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 MID1IP1Q9NPA3 183 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 RAD18Q9NS91 495 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 NLGN3Q9NZ94 848 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 MGAT4CQ9UBM8 478 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 RPH3ALQ9UNE2 315 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 DOCK3Q8IZD9 2030 aa6.53□□□□□ -1.36
VPS13B-205ENST00000493587 TDRD15B5MCY1 1934 aaKnown RBP6.52□□□□□ -1.36
VPS13B-205ENST00000493587 OR2W5A6NFC9 320 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 C5orf52A6NGY3 159 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 CBY3A6NI87 242 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 ARNTLO00327 626 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 PFKMP08237 780 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 SMPD1P17405 629 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 S100A11P31949 105 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 DIO3P55073 304 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 CTBP2P56545 445 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 NUTF2P61970 127 aaKnown RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 NAE1Q13564 534 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 HABP2Q14520 560 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 GBX1Q14549 363 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 GINS1Q14691 196 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 MICBQ29980 383 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 UGT3A2Q3SY77 523 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 LBHQ53QV2 105 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 Q5PR19 223 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 C1orf94Q6P1W5 598 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 DEGS2Q6QHC5 323 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 VHLLQ6RSH7 139 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 KCNMB4Q86W47 210 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 PTRH1Q86Y79 214 aaKnown RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 GPR65Q8IYL9 337 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 ACVR1CQ8NER5 493 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 JOSD2Q8TAC2 188 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 STYXQ8WUJ0 223 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 CCDC115Q96NT0 180 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 WDFY2Q96P53 400 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 POLR2J2Q9GZM3 115 aaKnown RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 ENAMQ9NRM1 1142 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 ZSCAN32Q9NX65 697 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 AKAP7Q9P0M2 348 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms