RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 CD1DP15813 335 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 PTGDSP41222 190 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 IRF8Q02556 426 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 LAPTM5Q13571 262 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 CDKL4Q5MAI5 379 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 TIGD3Q6B0B8 471 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 SULT1C3Q6IMI6 304 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 PRSS57Q6UWY2 283 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 C22orf34Q6ZV56 151 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 GPR180Q86V85 440 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 GPSM1Q86YR5 675 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 GCNT2Q8N0V5 402 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 ZNF615Q8N8J6 731 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 PDPRQ8NCN5 879 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 SIMC1Q8NDZ2 872 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 IGFBPL1Q8WX77 278 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 RIT1Q92963 219 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 INTS12Q96CB8 462 aaKnown RBP12.03□□□□□ -0.48
USF1-206ENST00000491629 TMEM41AQ96HV5 264 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 PBKQ96KB5 322 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 WFIKKN1Q96NZ8 548 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 SFXN3Q9BWM7 321 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 POPDC3Q9HBV1 291 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.03□□□□□ -0.48
USF1-206ENST00000491629 CLCF1Q9UBD9 225 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 SPACA6W5XKT8 324 aa12.03□□□□□ -0.48
USF1-206ENST00000491629 YLPM1P49750 1951 aaKnown RBP12.02□□□□□ -0.49
USF1-206ENST00000491629 C2orf92A0A1B0GVN3 265 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 C2orf72A6NCS6 295 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 PGRMC1O00264 195 aaKnown RBP12.02□□□□□ -0.49
USF1-206ENST00000491629 TP53I11O14683 189 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 PHGDHO43175 533 aaKnown RBP12.02□□□□□ -0.49
USF1-206ENST00000491629 CCNT2O60583 730 aaKnown RBP12.02□□□□□ -0.49
USF1-206ENST00000491629 ERN1O75460 977 aaKnown RBP12.02□□□□□ -0.49
USF1-206ENST00000491629 SNX4O95219 450 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 CCDC166P0CW27 439 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 CPN1P15169 458 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 S1PR1P21453 382 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 CCKARP32238 428 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 MASP1P48740 699 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 FAM27E3Q08E93 113 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 MGAT5Q09328 741 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 BIKQ13323 160 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 SF3B4Q15427 424 aaKnown RBP eCLIP12.02□□□□□ -0.49
USF1-206ENST00000491629 PPP1R7Q15435 360 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 PACS2Q86VP3 889 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 TAGAPQ8N103 731 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 TCAIMQ8N3R3 496 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 ZCCHC7Q8N3Z6 543 aaKnown RBP12.02□□□□□ -0.49
USF1-206ENST00000491629 GRK7Q8WTQ7 553 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 TP53INP1Q96A56 240 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 CTHRC1Q96CG8 243 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 PERPQ96FX8 193 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 CMTM7Q96FZ5 175 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 HS3ST6Q96QI5 342 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 UCN2Q96RP3 112 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 SECISBP2Q96T21 854 aaKnown RBP12.02□□□□□ -0.49
USF1-206ENST00000491629 KRT12Q99456 494 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 BDH2Q9BUT1 245 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 CD244Q9BZW8 370 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 DDX47Q9H0S4 455 aaKnown RBP12.02□□□□□ -0.49
USF1-206ENST00000491629 RHOJQ9H4E5 214 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 CNOT10Q9H9A5 744 aaKnown RBP12.02□□□□□ -0.49
USF1-206ENST00000491629 CXorf21Q9HAI6 301 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 ASIC3Q9UHC3 531 aa12.02□□□□□ -0.49
USF1-206ENST00000491629 A0A0A6YYD5 115 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 B4DXG7 233 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 PGRMC2O15173 223 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 DYRK3O43781 588 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 AIFM1O95831 613 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 ACTL6AO96019 429 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 ABCB1P08183 1280 aaPredicted RBP12.01□□□□□ -0.49
USF1-206ENST00000491629 CYP4B1P13584 511 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 ABCD3P28288 659 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 GALNSP34059 522 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 BSGP35613 385 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 CPA2P48052 419 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 STARP49675 285 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 PCDH1Q08174 1060 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 FUT7Q11130 342 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 DLG1Q12959 904 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 CAPRIN1Q14444 709 aaKnown RBP12.01□□□□□ -0.49
USF1-206ENST00000491629 TOMM20Q15388 145 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 ACKR1Q16570 336 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 HIST2H2ACQ16777 129 aaPredicted RBP12.01□□□□□ -0.49
USF1-206ENST00000491629 PAGE2BQ5JRK9 111 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 HIST2H2AA3Q6FI13 130 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 MED27Q6P2C8 311 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 ANGPTL8Q6UXH0 198 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 PDIK1LQ8N165 341 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 HUS1BQ8NHY5 278 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 ACTRT1Q8TDG2 376 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 HGDQ93099 445 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 PIGTQ969N2 578 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 RGMAQ96B86 450 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 UBXN10Q96LJ8 280 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 NODALQ96S42 347 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 NXF5Q9H1B4 397 aaKnown RBP12.01□□□□□ -0.49
USF1-206ENST00000491629 GALNT9Q9HCQ5 603 aa12.01□□□□□ -0.49
USF1-206ENST00000491629 SNX15Q9NRS6 342 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms