RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 PLATP00750 562 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 HSD3B1P14060 373 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 NPR2P20594 1047 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 HSD3B2P26439 372 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 OXTRP30559 389 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 ACTC1P68032 377 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 ACTA1P68133 377 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 CATSPEREQ5SY80 951 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 PLBD1Q6P4A8 553 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 KDM1BQ8NB78 822 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 NDUFV2P19404 249 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 APOFQ13790 326 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 LETMD1Q6P1Q0 360 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 ZNF551Q7Z340 670 aaPredicted RBP16.8■□□□□ 0.28
NPHP4-209ENST00000489180 TMIEQ8NEW7 156 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 CCDC86Q9H6F5 360 aaKnown RBP16.8■□□□□ 0.28
NPHP4-209ENST00000489180 C1orf226A1L170 272 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 COL28A1Q2UY09 1125 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 OR52E2Q8NGJ4 325 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 OR2M4Q96R27 311 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 CD93Q9NPY3 652 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 SERTAD3Q9UJW9 196 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 GKN3PP0CG01 181 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 GNRHRP30968 328 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 OPRL1P41146 370 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 FRKP42685 505 aaPredicted RBP16.8■□□□□ 0.28
NPHP4-209ENST00000489180 UGT3A2Q3SY77 523 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 MTFR2Q6P444 385 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 ZNF611Q8N823 705 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 ABHD11Q8NFV4 315 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 G6PC3Q9BUM1 346 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 GABRQQ9UN88 632 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 M0R129 80 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 SOX30O94993 753 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 CCL5P13501 91 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 NAGSQ8N159 534 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 DTWD1Q8N5C7 304 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 OR13C3Q8NGS6 347 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 C16orf78Q8WTQ4 265 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 SORT1Q99523 831 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 RXFP3Q9NSD7 469 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 NOX1Q9Y5S8 564 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 MEIS3P2A8K0S8 358 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 OXSR1O95747 527 aaPredicted RBP16.8■□□□□ 0.28
NPHP4-209ENST00000489180 PENKP01210 267 aaPredicted RBP16.8■□□□□ 0.28
NPHP4-209ENST00000489180 RHOP08100 348 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 ADORA3P0DMS8 318 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 CIDECQ96AQ7 238 aaPredicted RBP16.8■□□□□ 0.28
NPHP4-209ENST00000489180 ZNF689Q96CS4 500 aaPredicted RBP16.8■□□□□ 0.28
NPHP4-209ENST00000489180 SYT4Q9H2B2 425 aa16.8■□□□□ 0.28
NPHP4-209ENST00000489180 AGAP5A6NIR3 686 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 SOBPA7XYQ1 873 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 KLF8O95600 359 aaPredicted RBP16.79■□□□□ 0.28
NPHP4-209ENST00000489180 CYP17A1P05093 508 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 RCAN2Q14206 197 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 CDK10Q15131 360 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 PROKR1Q8TCW9 393 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 KCNN1Q92952 543 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 NALCNQ8IZF0 1738 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 IGLON5A6NGN9 336 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 E2F3O00716 465 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 APOC3P02656 99 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 NR2C1P13056 603 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 ETV4P43268 484 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 PPP5CP53041 499 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 C1orf61Q13536 156 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 PNCKQ6P2M8 343 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 PRSS48Q7RTY5 328 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 OR4K13Q8NH42 304 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 ANKRD60Q9BZ19 345 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 FZD3Q9NPG1 666 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 B4GAT1O43505 415 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 CAPNS1P04632 268 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 GRIK2Q13002 908 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 TSPYL5Q86VY4 417 aaPredicted RBP16.79■□□□□ 0.28
NPHP4-209ENST00000489180 MAFIPQ8WZ33 124 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 OR4K3Q96R72 315 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 TSNAXQ99598 290 aaKnown RBP16.79■□□□□ 0.28
NPHP4-209ENST00000489180 KCNK13Q9HB14 408 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 SPO11Q9Y5K1 396 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 MTNR1AP48039 350 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 KCTD18Q6PI47 426 aaPredicted RBP16.79■□□□□ 0.28
NPHP4-209ENST00000489180 UGT2A3Q6UWM9 527 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 ZDHHC1Q8WTX9 485 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 CNN2Q99439 309 aaKnown RBP16.79■□□□□ 0.28
NPHP4-209ENST00000489180 STRA6Q9BX79 667 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 GSTO2Q9H4Y5 243 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 HSPE1-MOB4S4R3N1 261 aa16.79■□□□□ 0.28
NPHP4-209ENST00000489180 XRN1Q8IZH2 1706 aaKnown RBP16.79■□□□□ 0.28
NPHP4-209ENST00000489180 TEX13CA0A0J9YWL9 993 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 LATO43561 262 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 ACBD7Q8N6N7 88 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 TESCQ96BS2 214 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 BORCS8Q96FH0 119 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 ZNF285Q96NJ3 590 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 MTG2Q9H4K7 406 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 PTGES2Q9H7Z7 377 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 LIPT1Q9Y234 373 aa16.78■□□□□ 0.28
NPHP4-209ENST00000489180 A0A1W2PQL4 384 aaPredicted RBP16.78■□□□□ 0.28
NPHP4-209ENST00000489180 COQ5Q5HYK3 327 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms