RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 RNF215Q9Y6U7 377 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 NINLQ9Y2I6 1382 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 GAGE12JA6NER3 117 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 C5orf60A6NFR6 353 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 A6NNC1 897 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 WASHC1A8K0Z3 465 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 C15orf62A8K5M9 175 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 IQCF5A8MTL0 148 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 HHLA1C9JL84 531 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 E5RGE8 158 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 PSMD11O00231 422 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 MDM4O15151 490 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 INSIG1O15503 277 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 BUD23O43709 281 aaKnown RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 CBR3O75828 277 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 BMP10O95393 424 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 EML2O95834 649 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 CST1P01037 141 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 APOHP02749 345 aaPredicted RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 OPN1LWP04000 364 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 VTNP04004 478 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 H1F0P07305 194 aaKnown RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 PLEKP08567 350 aaPredicted RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 ANXA4P09525 319 aaPredicted RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 CYP2B6P20813 491 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 CTNNA2P26232 953 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 OTX1P32242 354 aaPredicted RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 UGT1A5P35504 534 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 MAGEA8P43361 318 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 CASP4P49662 377 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 LIMK2P53671 638 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 SELENOVP59797 346 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 NOP14P78316 857 aaKnown RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 BDH1Q02338 343 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 CKAP5Q14008 2032 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 CTTNQ14247 550 aaKnown RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 GANABQ14697 944 aaKnown RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 CTF1Q16619 201 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 ZNF699Q32M78 642 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 ITPRIPL2Q3MIP1 535 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 PHLDA2Q53GA4 152 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 TEX44Q53QW1 395 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 ZNF542PQ5EBM4 170 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 MTX3Q5HYI7 312 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 PLCXD3Q63HM9 321 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 SNRNP48Q6IEG0 339 aaKnown RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 OR7E24Q6IFN5 339 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 ERICH5Q6P6B1 374 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 CTR9Q6PD62 1173 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 FGD5Q6ZNL6 1462 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 LUZP2Q86TE4 346 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 TPRA1Q86W33 373 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 LRRC49Q8IUZ0 686 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 ZC3H3Q8IXZ2 948 aaKnown RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 PNPLA6Q8IY17 1366 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 EFCAB13Q8IY85 973 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 FAM9CQ8IZT9 166 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 LGI2Q8N0V4 545 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 TMEM123Q8N131 208 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 CLHC1Q8NHS4 586 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 CD99L2Q8TCZ2 262 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 MAGEC3Q8TD91 643 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 MYO3BQ8WXR4 1341 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 TMEM37Q8WXS4 190 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 RAB1CQ92928 201 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 CIDECQ96AQ7 238 aaPredicted RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 KIAA1143Q96AT1 154 aaPredicted RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 SGK3Q96BR1 496 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 SH3YL1Q96HL8 342 aaPredicted RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 ZFYVE19Q96K21 471 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 ZNF521Q96K83 1311 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 APOLD1Q96LR9 279 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 C10orf90Q96M02 699 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 AMDHD1Q96NU7 426 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 RPRD1AQ96P16 312 aaPredicted RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 CMKLR1Q99788 373 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 LLPHQ9BRT6 129 aaKnown RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 PARD6BQ9BYG5 372 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 SEMA4CQ9C0C4 833 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 POLR3FQ9H1D9 316 aaPredicted RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 FBXO44Q9H4M3 255 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 AAMDCQ9H7C9 122 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 SYNDIG1Q9H7V2 258 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 KAT8Q9H7Z6 458 aaKnown RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 ANKRA2Q9H9E1 313 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 IL1RL2Q9HB29 575 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 LPAR2Q9HBW0 351 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 TECRQ9NZ01 308 aaKnown RBP3.06□□□□□ -1.92
PRPF4-203ENST00000488937 UBAP1Q9NZ09 502 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 NSG2Q9Y328 171 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 ETV7Q9Y603 341 aa3.06□□□□□ -1.92
PRPF4-203ENST00000488937 PPIAL4EA0A075B759 164 aa3.05□□□□□ -1.92
PRPF4-203ENST00000488937 LRRC30A6NM36 301 aa3.05□□□□□ -1.92
PRPF4-203ENST00000488937 ZNF732B4DXR9 585 aa3.05□□□□□ -1.92
PRPF4-203ENST00000488937 C9JVG2 144 aa3.05□□□□□ -1.92
PRPF4-203ENST00000488937 H3BTX0 84 aa3.05□□□□□ -1.92
PRPF4-203ENST00000488937 STX7O15400 261 aaKnown RBP3.05□□□□□ -1.92
PRPF4-203ENST00000488937 TLX3O43711 291 aaPredicted RBP3.05□□□□□ -1.92
PRPF4-203ENST00000488937 DUX1O43812 170 aa3.05□□□□□ -1.92
PRPF4-203ENST00000488937 CLPXO76031 633 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms