RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 HS6ST2Q96MM7 605 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 PPP1R2P1Q96PQ5 205 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 DOHHQ9BU89 302 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 CHODLQ9H9P2 273 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 RIMKLBQ9ULI2 386 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 A0A0A6YYJ9 748 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 FAM157AC9JC47 383 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 SLCO1B7G3V0H7 640 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 PSMD12O00232 456 aaPredicted RBP10.55□□□□□ -0.72
TRIM56-204ENST00000487252 NDUFS4O43181 175 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 SSX4O60224 188 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 TRAPPC6AO75865 159 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 SMNDC1O75940 238 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRIM56-204ENST00000487252 CD8AP01732 235 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 GSTA2P09210 222 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 PPP3CBP16298 524 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 RPS3P23396 243 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRIM56-204ENST00000487252 SKIV2L2P42285 1042 aaKnown RBP10.55□□□□□ -0.72
TRIM56-204ENST00000487252 GZMKP49863 264 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 ASPHQ12797 758 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 BMPR2Q13873 1038 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 NRF1Q16656 503 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 KLHL38Q2WGJ6 581 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 EIPR1Q53HC9 387 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 THEMIS2Q5TEJ8 643 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 PTRHD1Q6GMV3 140 aaKnown RBP10.55□□□□□ -0.72
TRIM56-204ENST00000487252 SCIMPQ6UWF3 145 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 STRA8Q7Z7C7 330 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 DND1Q8IYX4 353 aaKnown RBP10.55□□□□□ -0.72
TRIM56-204ENST00000487252 SLC15A4Q8N697 577 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 CCDC197Q8NCU1 140 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 OR10G3Q8NGC4 313 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 NUBPLQ8TB37 319 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 NT5CQ8TCD5 201 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 PYROXD1Q8WU10 500 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 MZB1Q8WU39 189 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 FBXW5Q969U6 566 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 REPS1Q96D71 796 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 NSRP1Q9H0G5 558 aaKnown RBP10.55□□□□□ -0.72
TRIM56-204ENST00000487252 OPN3Q9H1Y3 402 aaPredicted RBP10.55□□□□□ -0.72
TRIM56-204ENST00000487252 ABCF3Q9NUQ8 709 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 PSMC3IPQ9P2W1 217 aaPredicted RBP10.55□□□□□ -0.72
TRIM56-204ENST00000487252 SLC2A6Q9UGQ3 507 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 MAPRE3Q9UPY8 281 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 C15orf41Q9Y2V0 281 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 TEX264Q9Y6I9 313 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 CLCA3PQ9Y6N3 262 aa10.55□□□□□ -0.72
TRIM56-204ENST00000487252 SYNDIG1LA6NDD5 238 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 GOLGA8MH3BSY2 632 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 HCRTR2O43614 444 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 BANF1O75531 89 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 ZNF189O75820 626 aaPredicted RBP10.54□□□□□ -0.72
TRIM56-204ENST00000487252 TGM6O95932 706 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 CATP04040 527 aaKnown RBP10.54□□□□□ -0.72
TRIM56-204ENST00000487252 FBXO45P0C2W1 286 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 PAMP19021 973 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 TPSB2P20231 275 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 IMPA1P29218 277 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 MAGEA3P43357 314 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 KIR2DL2P43627 348 aaPredicted RBP10.54□□□□□ -0.72
TRIM56-204ENST00000487252 HNRNPFP52597 415 aaKnown RBP10.54□□□□□ -0.72
TRIM56-204ENST00000487252 WDR4P57081 412 aaKnown RBP10.54□□□□□ -0.72
TRIM56-204ENST00000487252 BASP1P80723 227 aaKnown RBP10.54□□□□□ -0.72
TRIM56-204ENST00000487252 FUT7Q11130 342 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 TPSAB1Q15661 275 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 TBCELQ5QJ74 424 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 ANKRD34AQ69YU3 496 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 TREML4Q6UXN2 200 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 LRRC6Q86X45 466 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 ANKMY2Q8IV38 441 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 IGDCC3Q8IVU1 814 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 OTUD6BQ8N6M0 293 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 TMEM52Q8NDY8 209 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 FBXO36Q8NEA4 188 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 OR14A16Q8NHC5 309 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 GABPB2Q8TAK5 448 aaPredicted RBP10.54□□□□□ -0.72
TRIM56-204ENST00000487252 RAB3IL1Q8TBN0 382 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 DCAKDQ8WVC6 231 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 CCT6BQ92526 530 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 DAZLQ92904 295 aaKnown RBP10.54□□□□□ -0.72
TRIM56-204ENST00000487252 LRRC39Q96DD0 335 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 MAGEB18Q96M61 343 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 GNRHR2Q96P88 292 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 TRAF4Q9BUZ4 470 aaPredicted RBP10.54□□□□□ -0.72
TRIM56-204ENST00000487252 RHBGQ9H310 441 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 RYDENQ9NUL5 291 aaKnown RBP10.54□□□□□ -0.72
TRIM56-204ENST00000487252 PIH1D1Q9NWS0 290 aaKnown RBP10.54□□□□□ -0.72
TRIM56-204ENST00000487252 NKIRAS1Q9NYS0 192 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 MARCH4Q9P2E8 410 aaPredicted RBP10.54□□□□□ -0.72
TRIM56-204ENST00000487252 VTI1BQ9UEU0 232 aa10.54□□□□□ -0.72
TRIM56-204ENST00000487252 CCT8L1PA6NM43 557 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 C4orf51C9J302 202 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 POC1B-GALNT4F8VUJ3 575 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 TYROBPO43914 113 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 SNX3O60493 162 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 CD8BP10966 210 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 TBXA2RP21731 343 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 SSTR1P30872 391 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 ELK3P41970 407 aa10.53□□□□□ -0.72
TRIM56-204ENST00000487252 TTPAP49638 278 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms