RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 UCN3Q969E3 161 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 TMEM41AQ96HV5 264 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 DACH2Q96NX9 599 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 RBBP8Q99708 897 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 RBM24Q9BX46 236 aaKnown RBP17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 TRIM31Q9BZY9 425 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 ZNF395Q9H8N7 513 aaPredicted RBP17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 LYARQ9NX58 379 aaKnown RBP17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 TXNDC16Q9P2K2 825 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 SUPT3HB4E1H0 165 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 UBXN8O00124 270 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 GNB5O14775 395 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 ERN1O75460 977 aaKnown RBP17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 SUPT3HO75486 399 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 AIFM1O95831 613 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 PTPN6P29350 595 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 SLCO1A2P46721 670 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 ARFIP1P53367 373 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 RAB10P61026 200 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 RPS13P62277 151 aaKnown RBP17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 RCAN2Q14206 197 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 HLA-DQA1Q5Y7H0 255 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 TIGD3Q6B0B8 471 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 YRDCQ86U90 279 aaKnown RBP17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 PRR22Q8IZ63 422 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 STAG3L4Q8TBR4 150 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 ZPLD1Q8TCW7 415 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 ADIPOR1Q96A54 375 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 NTNG2Q96CW9 530 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 CPNE1Q99829 537 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 CXorf21Q9HAI6 301 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 GALNT8Q9NY28 637 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 FREM3P0C091 2139 aa17.74■□□□□ 0.43
SMPDL3A-202ENST00000487215 MPDZO75970 2070 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 SH3D21A4FU49 640 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 CT62P0C5K7 136 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 FAM58BPP0C7Q3 252 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 EPB42P16452 691 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 SSTR1P30872 391 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 BSGP35613 385 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 RPP38P78345 283 aaKnown RBP17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 DLG1Q12959 904 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 CBLBQ13191 982 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 LUZP2Q86TE4 346 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 ISCA2Q86U28 154 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 MYLK4Q86YV6 388 aaPredicted RBP17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 GALNT12Q8IXK2 581 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 VWA5B2Q8N398 1253 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 ZNF615Q8N8J6 731 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 FAM83FQ8NEG4 500 aaPredicted RBP17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 SMPDL3BQ92485 455 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 CDKL2Q92772 493 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 ISL2Q96A47 359 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 ATOH8Q96SQ7 321 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 SFXN3Q9BWM7 321 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 DDX31Q9H8H2 851 aaKnown RBP17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 WDR41Q9HAD4 459 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 FETUBQ9UGM5 382 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 TSC22D4Q9Y3Q8 395 aa17.73■□□□□ 0.43
SMPDL3A-202ENST00000487215 FBN3Q75N90 2809 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 FN1P02751 2386 aaKnown RBP17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 FAM171A2A8MVW0 826 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 KERAO60938 352 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 LY6G6DO95868 133 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 ACTL6AO96019 429 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 CYP4B1P13584 511 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 PTX3P26022 381 aaPredicted RBP17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 GP5P40197 560 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 CPA2P48052 419 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 NRG3P56975 720 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 FUT7Q11130 342 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 SETDB1Q15047 1291 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 Q5PR19 223 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 OR52E8Q6IFG1 317 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 CYP20A1Q6UW02 462 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 TEX9Q8N6V9 391 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 SLC44A1Q8WWI5 657 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 COX4I2Q96KJ9 171 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 TUBA1CQ9BQE3 449 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 OR10A5Q9H207 317 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 PCDHGA11Q9Y5H2 935 aa17.72■□□□□ 0.43
SMPDL3A-202ENST00000487215 EFCAB8A8MWE9 144 aa17.71■□□□□ 0.43
SMPDL3A-202ENST00000487215 CCDC188H7C350 402 aa17.71■□□□□ 0.43
SMPDL3A-202ENST00000487215 PGRMC2O15173 223 aa17.71■□□□□ 0.43
SMPDL3A-202ENST00000487215 ABCD3P28288 659 aa17.71■□□□□ 0.43
SMPDL3A-202ENST00000487215 PAFAH1B1P43034 410 aa17.71■□□□□ 0.43
SMPDL3A-202ENST00000487215 ANGPTL8Q6UXH0 198 aa17.71■□□□□ 0.43
SMPDL3A-202ENST00000487215 CMC1Q7Z7K0 106 aa17.71■□□□□ 0.43
SMPDL3A-202ENST00000487215 PRIMA1Q86XR5 153 aa17.71■□□□□ 0.43
SMPDL3A-202ENST00000487215 OR1J4Q8NGS1 313 aa17.71■□□□□ 0.43
SMPDL3A-202ENST00000487215 PYROXD1Q8WU10 500 aa17.71■□□□□ 0.43
SMPDL3A-202ENST00000487215 NUDT8Q8WV74 236 aa17.71■□□□□ 0.43
SMPDL3A-202ENST00000487215 ZFP3Q96NJ6 502 aa17.71■□□□□ 0.43
SMPDL3A-202ENST00000487215 METTL7AQ9H8H3 244 aa17.71■□□□□ 0.43
SMPDL3A-202ENST00000487215 DOCK7Q96N67 2140 aa17.71■□□□□ 0.42
SMPDL3A-202ENST00000487215 TCRBV9S1A1TA0A576 114 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 FAM159BA6NKW6 160 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 H0YIV9 168 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 ARHGEF9O43307 516 aa17.7■□□□□ 0.42
SMPDL3A-202ENST00000487215 RCBTB2O95199 551 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms