RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 RHOXF1Q8NHV9 184 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 NETO1Q8TDF5 533 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 FAM129BQ96TA1 746 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 MCHR1Q99705 422 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 APOOQ9BUR5 198 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 ASPNQ9BXN1 380 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 SMURF1Q9HCE7 757 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 MS4A12Q9NXJ0 267 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 RARRES3Q9UL19 164 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 SIT1Q9Y3P8 196 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 PCDHGA8Q9Y5G5 932 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 SCN1AP35498 2009 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 C1orf226A1L170 272 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 H7C0S8 307 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 ARHGEF15O94989 841 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 CRYZL1O95825 349 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 HHEXQ03014 270 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 CDK5R2Q13319 367 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 TMEM107Q6UX40 140 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 PDZD3Q86UT5 571 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 TSPYL5Q86VY4 417 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-228ENST00000486227 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.49□□□□□ -0.73
HDAC6-228ENST00000486227 OR4K17Q8NGC6 315 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 TRIM43Q96BQ3 446 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-228ENST00000486227 OR8D2Q9GZM6 311 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 OR51I1Q9H343 314 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 KCNK12Q9HB15 430 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 SDHAF3Q9NRP4 125 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 SLAMF8Q9P0V8 285 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 HCN2Q9UL51 889 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 PADI2Q9Y2J8 665 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 CEP290O15078 2479 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 C12orf71A8MTZ7 269 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 UBFD1O14562 309 aaKnown RBP10.49□□□□□ -0.73
HDAC6-228ENST00000486227 OR2B3O76000 313 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 HTR2BP41595 481 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 PRLHRP49683 370 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 SMSP52788 366 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 SIM1P81133 766 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-228ENST00000486227 MC1RQ01726 317 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 RIPPLY1Q0D2K3 151 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 TMEM35AQ53FP2 167 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 UBE2UQ5VVX9 321 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 LINC00299Q6ZSB3 139 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 NAGSQ8N159 534 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 SLC37A3Q8NCC5 494 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 CHDHQ8NE62 594 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-228ENST00000486227 ARRDC3Q96B67 414 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 TSSK6Q9BXA6 273 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 DAPL1A0PJW8 107 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 AGAP5A6NIR3 686 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 CSF2P04141 144 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 IL1RNP18510 177 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 MAGEA12P43365 314 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 ST3GAL4Q11206 333 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 AGAP6Q5VW22 663 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 SH2D5Q6ZV89 423 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 RETREG3Q86VR2 466 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 CCDC36Q8IYA8 594 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 TCEANCQ8N8B7 351 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 OR52E4Q8NGH9 312 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 AGAP4Q96P64 663 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 SORBS1Q9BX66 1292 aaKnown RBP10.48□□□□□ -0.73
HDAC6-228ENST00000486227 GPN1Q9HCN4 374 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-228ENST00000486227 FANCFQ9NPI8 374 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 TMEM45AQ9NWC5 275 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 DNAJC27Q9NZQ0 273 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 KLRF1Q9NZS2 232 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 CDRT1O95170 752 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 RPS15P62841 145 aaKnown RBP10.48□□□□□ -0.73
HDAC6-228ENST00000486227 SNTA1Q13424 505 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 DECR1Q16698 335 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.48□□□□□ -0.73
HDAC6-228ENST00000486227 AFMIDQ63HM1 303 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 SHQ1Q6PI26 577 aaKnown RBP10.48□□□□□ -0.73
HDAC6-228ENST00000486227 DHRS4L2Q6PKH6 230 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 SBSNQ6UWP8 590 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 HSDL2Q6YN16 418 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 FRRS1Q6ZNA5 592 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 ADGRD2Q7Z7M1 963 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 CSNK1A1LQ8N752 337 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 RLN3Q8WXF3 142 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 HSPA12BQ96MM6 686 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 MND1Q9BWT6 205 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 EMC8O43402 210 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 C1orf105O95561 183 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 FHP07954 510 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 DRD2P14416 443 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 JUNBP17275 347 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-228ENST00000486227 TNFRSF1BP20333 461 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 AK4P27144 223 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-228ENST00000486227 HOXA9P31269 272 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 STARP49675 285 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 EXOC3L2Q2M3D2 409 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 NDUFAF5Q5TEU4 345 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 FIGLAQ6QHK4 219 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 ZNF767PQ75MW2 155 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 LIMS2Q7Z4I7 341 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 C12orf40Q86WS4 652 aa10.48□□□□□ -0.73
HDAC6-228ENST00000486227 LINC00471Q8N535 108 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms