RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 SELENOMQ8WWX9 145 aa12.36□□□□□ -0.43
CTDSP1-208ENST00000482272 MRPL1Q9BYD6 325 aaKnown RBP12.36□□□□□ -0.43
CTDSP1-208ENST00000482272 ZNF703Q9H7S9 590 aaPredicted RBP12.36□□□□□ -0.43
CTDSP1-208ENST00000482272 PROK2Q9HC23 129 aa12.36□□□□□ -0.43
CTDSP1-208ENST00000482272 ZNF225Q9UK10 706 aa12.36□□□□□ -0.43
CTDSP1-208ENST00000482272 CNOT11Q9UKZ1 510 aaKnown RBP12.36□□□□□ -0.43
CTDSP1-208ENST00000482272 PSME2Q9UL46 239 aa12.36□□□□□ -0.43
CTDSP1-208ENST00000482272 SLC12A4Q9UP95 1085 aa12.36□□□□□ -0.43
CTDSP1-208ENST00000482272 CFL2Q9Y281 166 aa12.36□□□□□ -0.43
CTDSP1-208ENST00000482272 FAM215AQ9Y5M1 114 aa12.36□□□□□ -0.43
CTDSP1-208ENST00000482272 PHF3Q92576 2039 aaKnown RBP12.36□□□□□ -0.43
CTDSP1-208ENST00000482272 CACNA1CQ13936 2221 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 GOLGA6L10A6NI86 522 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 SNX4O95219 450 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 PDYNP01213 254 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 RPS17P08708 135 aaKnown RBP12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 CPMP14384 443 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 IGFBP2P18065 325 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 KRT15P19012 456 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 TSPAN8P19075 237 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 TAC1P20366 129 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 GDF1P27539 372 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 CDH13P55290 713 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 TFF3Q07654 80 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 RPS6KA2Q15349 733 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 C1orf185Q5T7R7 199 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 CES4AQ5XG92 561 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 RTL6Q6ICC9 239 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 PACS2Q86VP3 889 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 DMRTC2Q8IXT2 367 aaPredicted RBP12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 MMP21Q8N119 569 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 ZNF615Q8N8J6 731 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 ZNF441Q8N8Z8 693 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 NEIL3Q8TAT5 605 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 ZNF597Q96LX8 424 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 SECISBP2Q96T21 854 aaKnown RBP12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 C1QTNF3Q9BXJ4 246 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 BRF2Q9HAW0 419 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 FARSBQ9NSD9 589 aaKnown RBP12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 PCDHA9Q9Y5H5 950 aa12.35□□□□□ -0.43
CTDSP1-208ENST00000482272 ABCA12Q86UK0 2595 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 ZNF407Q9C0G0 2248 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 HCFC1P51610 2035 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 A0A0G2JNJ9 132 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 EXOC1LA0A1B0GW35 172 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 AHRRA9YTQ3 701 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 CDH16O75309 829 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 TRIM3O75382 744 aaPredicted RBP12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 ERAL1O75616 437 aaKnown RBP12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 TRAPPC6AO75865 159 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 LRATO95237 230 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 CT62P0C5K7 136 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 CSNK2A2P19784 350 aaPredicted RBP12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 SOX18P35713 384 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 MASP1P48740 699 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 FBXW4P57775 412 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 KRTAP10-9P60411 292 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 TRA2BP62995 288 aaKnown RBP12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 CLCQ05315 142 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 SF3B4Q15427 424 aaKnown RBP eCLIP12.34□□□□□ -0.439e-8■■□□□ 12.6
CTDSP1-208ENST00000482272 SLC48A1Q6P1K1 146 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 LETMD1Q6P1Q0 360 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 TMEM64Q6YI46 380 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 COMMD6Q7Z4G1 85 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 LRRN4CLQ8ND94 238 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 C17orf47Q8NEP4 570 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 SPPL2AQ8TCT8 520 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 ZNF483Q8TF39 744 aaPredicted RBP12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 ADIPOR1Q96A54 375 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 ZNF559Q9BR84 538 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 FAIM2Q9BWQ8 316 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 ANGPTL4Q9BY76 406 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 BRINP2Q9C0B6 783 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 NPDC1Q9NQX5 325 aaPredicted RBP12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 SPRR3Q9UBC9 169 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 Q9UFV3 132 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 TRPS1Q9UHF7 1281 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 ZNF780BQ9Y6R6 833 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 ADGRG4Q8IZF6 3080 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 MYO9AB2RTY4 2548 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 OTOGQ6ZRI0 2925 aa12.34□□□□□ -0.43
CTDSP1-208ENST00000482272 C15orf38-AP3S2A0A0A6YYH1 394 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 LRRC3CA6NJW4 275 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 HSPB2A8KAH6 182 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 A8MT66 165 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 SUPT7LO94864 414 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 OR4F21O95013 312 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 KRT6AP02538 564 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 KRT6BP04259 564 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 FAM153BP0C7A2 387 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 NAGAP17050 411 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 POU3F2P20265 443 aaPredicted RBP12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 ENDOUP21128 410 aaKnown RBP12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 HSD17B3P37058 310 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 KRT6CP48668 564 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 TRPC1P48995 793 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 DUSP2Q05923 314 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 MAP4K2Q12851 820 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 DUSP8Q13202 625 aa12.33□□□□□ -0.44
CTDSP1-208ENST00000482272 HSPB2Q16082 182 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms