RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 CDKN2DP55273 166 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 AP1S2P56377 157 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 C18orf21Q32NC0 220 aaPredicted RBP13.81□□□□□ -0.2
SMG5-204ENST00000476954 RBM20Q5T481 1227 aaKnown RBP13.81□□□□□ -0.2
SMG5-204ENST00000476954 CYB5R2Q6BCY4 276 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 OR2A2Q6IF42 318 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 SLCO4C1Q6ZQN7 724 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 MILR1Q7Z6M3 343 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 CCDC89Q8N998 374 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 FBXW5Q969U6 566 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 REPS1Q96D71 796 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 RBM18Q96H35 190 aaKnown RBP13.81□□□□□ -0.2
SMG5-204ENST00000476954 NTMT1Q9BV86 223 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 LYRM4Q9HD34 91 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 COMMD10Q9Y6G5 202 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 KCNE2Q9Y6J6 123 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 C2orf92A0A1B0GVN3 265 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 EMC8O43402 210 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 CLEC3AO75596 197 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 CD8AP01732 235 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 CD8BP10966 210 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 CPN2P22792 545 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 SSTR4P31391 388 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 PCDH1Q08174 1060 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 LOXL1Q08397 574 aaPredicted RBP13.8□□□□□ -0.2
SMG5-204ENST00000476954 SETDB1Q15047 1291 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 PGGHGQ32M88 737 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 ADAM5Q6NVV9 412 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 CASC4Q6P4E1 433 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 SCIMPQ6UWF3 145 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 ATG4DQ86TL0 474 aaPredicted RBP13.8□□□□□ -0.2
SMG5-204ENST00000476954 IFNEQ86WN2 208 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 ACOT4Q8N9L9 421 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 WDSUB1Q8N9V3 476 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 OR10H5Q8NGA6 315 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 NODALQ96S42 347 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 METTL7AQ9H8H3 244 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 MANSC1Q9H8J5 431 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMG5-204ENST00000476954 FBXO5Q9UKT4 447 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 PROCRQ9UNN8 238 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 MAD1L1Q9Y6D9 718 aa13.8□□□□□ -0.2
SMG5-204ENST00000476954 ZCWPW2A0A1B0GU75 182 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 A0A1W2PP18 115 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 PABPN1LA6NDY0 278 aaKnown RBP13.79□□□□□ -0.2
SMG5-204ENST00000476954 CAPN14A8MX76 684 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 H0YC42 278 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 DYRK3O43781 588 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 ICOSLGO75144 302 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 SH3BGRLO75368 114 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 ALOX15P16050 662 aaPredicted RBP13.79□□□□□ -0.2
SMG5-204ENST00000476954 ITGA2P17301 1181 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 ATP5A1P25705 553 aaKnown RBP13.79□□□□□ -0.2
SMG5-204ENST00000476954 GDF5P43026 501 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 TPD52P55327 224 aaPredicted RBP13.79□□□□□ -0.2
SMG5-204ENST00000476954 PLIN5Q00G26 463 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 ZNF844Q08AG5 666 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 CYP1B1Q16678 543 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 STAC2Q6ZMT1 411 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 UBQLNLQ8IYU4 475 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 BBOF1Q8ND07 529 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 HTRA1Q92743 480 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 SFXN2Q96NB2 322 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 SORBS1Q9BX66 1292 aaKnown RBP13.79□□□□□ -0.2
SMG5-204ENST00000476954 TRIM54Q9BYV2 358 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 SNX15Q9NRS6 342 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 TAS2R10Q9NYW0 307 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 ZNF490Q9ULM2 529 aaPredicted RBP13.79□□□□□ -0.2
SMG5-204ENST00000476954 RNF115Q9Y4L5 304 aa13.79□□□□□ -0.2
SMG5-204ENST00000476954 ANKDD1BA6NHY2 528 aa13.78□□□□□ -0.2
SMG5-204ENST00000476954 PRAMEF4O60810 478 aa13.78□□□□□ -0.2
SMG5-204ENST00000476954 H2AFYO75367 372 aaKnown RBP13.78□□□□□ -0.2
SMG5-204ENST00000476954 ABCB1P08183 1280 aaPredicted RBP13.78□□□□□ -0.2
SMG5-204ENST00000476954 CLDN15P56746 228 aa13.78□□□□□ -0.2
SMG5-204ENST00000476954 SPRED3Q2MJR0 410 aa13.78□□□□□ -0.2
SMG5-204ENST00000476954 PRAMEF9Q5VWM5 478 aa13.78□□□□□ -0.2
SMG5-204ENST00000476954 C18orf63Q68DL7 685 aa13.78□□□□□ -0.2
SMG5-204ENST00000476954 TTLQ8NG68 377 aa13.78□□□□□ -0.2
SMG5-204ENST00000476954 TRAF4Q9BUZ4 470 aaPredicted RBP13.78□□□□□ -0.2
SMG5-204ENST00000476954 C12orf65Q9H3J6 166 aaKnown RBP13.78□□□□□ -0.2
SMG5-204ENST00000476954 ACTR8Q9H981 624 aa13.78□□□□□ -0.2
SMG5-204ENST00000476954 BARX1Q9HBU1 254 aaPredicted RBP13.78□□□□□ -0.2
SMG5-204ENST00000476954 C20orf96Q9NUD7 363 aaPredicted RBP13.78□□□□□ -0.2
SMG5-204ENST00000476954 A0A1W2PS29 197 aa13.77□□□□□ -0.21
SMG5-204ENST00000476954 OR6C76A6NM76 312 aa13.77□□□□□ -0.21
SMG5-204ENST00000476954 AP3B1O00203 1094 aa13.77□□□□□ -0.21
SMG5-204ENST00000476954 FTCDO95954 541 aa13.77□□□□□ -0.21
SMG5-204ENST00000476954 PPP3CBP16298 524 aa13.77□□□□□ -0.21
SMG5-204ENST00000476954 CNTFP26441 200 aa13.77□□□□□ -0.21
SMG5-204ENST00000476954 NNATQ16517 81 aa13.77□□□□□ -0.21
SMG5-204ENST00000476954 VSTM4Q8IW00 320 aa13.77□□□□□ -0.21
SMG5-204ENST00000476954 ST13P4Q8IZP2 240 aaPredicted RBP13.77□□□□□ -0.21
SMG5-204ENST00000476954 GPATCH11Q8N954 259 aa13.77□□□□□ -0.21
SMG5-204ENST00000476954 KBTBD8Q8NFY9 601 aa13.77□□□□□ -0.21
SMG5-204ENST00000476954 FNDC9Q8TBE3 224 aa13.77□□□□□ -0.21
SMG5-204ENST00000476954 HGDQ93099 445 aa13.77□□□□□ -0.21
SMG5-204ENST00000476954 TP53INP1Q96A56 240 aa13.77□□□□□ -0.21
SMG5-204ENST00000476954 OSBPL11Q9BXB4 747 aa13.77□□□□□ -0.21
SMG5-204ENST00000476954 TSGA10Q9BZW7 698 aa13.77□□□□□ -0.21
SMG5-204ENST00000476954 ACTR6Q9GZN1 396 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms