RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 MUC21Q5SSG8 566 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 CWC27Q6UX04 472 aaKnown RBP4.85□□□□□ -1.63
VPS50-212ENST00000476413 ZNF497Q6ZNH5 498 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 RPAINQ86UA6 219 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 CERS5Q8N5B7 392 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 BANPQ8N9N5 519 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 MLKLQ8NB16 471 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 ICA1LQ8NDH6 482 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 FBXO25Q8TCJ0 367 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 MIPOL1Q8TD10 442 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 CHPT1Q8WUD6 406 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 NAF1Q96HR8 494 aaKnown RBP4.85□□□□□ -1.63
VPS50-212ENST00000476413 ST6GALNAC5Q9BVH7 336 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 MOB1AQ9H8S9 216 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 NRN1Q9NPD7 142 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 IKZF3Q9UKT9 509 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 ZNF346Q9UL40 294 aaKnown RBP4.85□□□□□ -1.63
VPS50-212ENST00000476413 SPATA2Q9UM82 520 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 ATP6V0A2Q9Y487 856 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 TDRD15B5MCY1 1934 aaKnown RBP4.84□□□□□ -1.63
VPS50-212ENST00000476413 SYNJ2O15056 1496 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 ABCC4O15439 1325 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 RNF222A6NCQ9 220 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 CHADO15335 359 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 DCXO43602 365 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 DIRAS3O95661 229 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 IFNB1P01574 187 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 IGHG3P01860 377 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 HCKP08631 526 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 OR9G9P0C7N8 305 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 DPEP1P16444 411 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 PPP2R1AP30153 589 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 HPDP32754 393 aaPredicted RBP4.84□□□□□ -1.63
VPS50-212ENST00000476413 ETV5P41161 510 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 MATKP42679 507 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 RFTN1Q14699 578 aaPredicted RBP4.84□□□□□ -1.63
VPS50-212ENST00000476413 DDI2Q5TDH0 399 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 PAQR9Q6ZVX9 377 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 ZNF491Q8N8L2 437 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 TAF15Q92804 592 aaKnown RBP eCLIP4.84□□□□□ -1.63
VPS50-212ENST00000476413 NTNG2Q96CW9 530 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 SLC45A3Q96JT2 553 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 C16orf45Q96MC5 204 aaPredicted RBP4.84□□□□□ -1.63
VPS50-212ENST00000476413 CPXM1Q96SM3 734 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 OCR1Q9BZK8 76 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 STRADBQ9C0K7 418 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 NACA2Q9H009 215 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 POLE3Q9NRF9 147 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 YAE1D1Q9NRH1 226 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 ANKMY1Q9P2S6 941 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 CTSZQ9UBR2 303 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 BCAP29Q9UHQ4 241 aa4.84□□□□□ -1.63
VPS50-212ENST00000476413 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.84□□□□□ -1.63
VPS50-212ENST00000476413 AFF2P51816 1311 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 A0A0U1RQV5 110 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 H7C423 109 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 PDXKO00764 312 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 SORBS2O94875 1100 aaKnown RBP4.83□□□□□ -1.64
VPS50-212ENST00000476413 NDUFA7O95182 113 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 DESP17661 470 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 PTPN6P29350 595 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 GSK3BP49841 420 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 HYAL1Q12794 435 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 PDZK1IP1Q13113 114 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 ADPRMQ3LIE5 342 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 GOLGA7Q7Z5G4 137 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 PHC2Q8IXK0 858 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 SELENOMQ8WWX9 145 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 FCGR1BQ92637 280 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 SLC25A36Q96CQ1 311 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 WRAP53Q9BUR4 548 aaKnown RBP4.83□□□□□ -1.64
VPS50-212ENST00000476413 ATXN10Q9UBB4 475 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 P2RX2Q9UBL9 471 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 ZNF490Q9ULM2 529 aaPredicted RBP4.83□□□□□ -1.64
VPS50-212ENST00000476413 FBXO7Q9Y3I1 522 aa4.83□□□□□ -1.64
VPS50-212ENST00000476413 BCLAF3A2AJT9 711 aaKnown RBP4.82□□□□□ -1.64
VPS50-212ENST00000476413 E9PMD0 336 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 SGK494L7N484 410 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 TOXO94900 526 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 SEMA4FO95754 770 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 ZNF10P21506 573 aaPredicted RBP4.82□□□□□ -1.64
VPS50-212ENST00000476413 UCP1P25874 307 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 MDH1P40925 334 aaKnown RBP4.82□□□□□ -1.64
VPS50-212ENST00000476413 PRKCEQ02156 737 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 SCGB2A2Q13296 93 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 EMC2Q15006 297 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 OTUD3Q5T2D3 398 aaPredicted RBP4.82□□□□□ -1.64
VPS50-212ENST00000476413 DOK6Q6PKX4 331 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 BHLHA9Q7RTU4 235 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 PYROXD2Q8N2H3 581 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 ARFGAP2Q8N6H7 521 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 WDR36Q8NI36 951 aaKnown RBP4.82□□□□□ -1.64
VPS50-212ENST00000476413 CCDC110Q8TBZ0 833 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 ZNF599Q96NL3 588 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 TUBB1Q9H4B7 451 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 ALG9Q9H6U8 611 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 MBD2Q9UBB5 411 aa4.82□□□□□ -1.64
VPS50-212ENST00000476413 EIF3KQ9UBQ5 218 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms