RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 VLDLRP98155 873 aa18.58■□□□□ 0.56
SSR1-204ENST00000474597 MAT1AQ00266 395 aaKnown RBP18.58■□□□□ 0.56
SSR1-204ENST00000474597 PERM1Q5SV97 790 aa18.58■□□□□ 0.56
SSR1-204ENST00000474597 OR2T5Q6IEZ7 315 aa18.58■□□□□ 0.56
SSR1-204ENST00000474597 STK32CQ86UX6 486 aa18.58■□□□□ 0.56
SSR1-204ENST00000474597 SHISA5Q8N114 240 aa18.58■□□□□ 0.56
SSR1-204ENST00000474597 LGI4Q8N135 537 aa18.58■□□□□ 0.56
SSR1-204ENST00000474597 METTL27Q8N6F8 245 aaPredicted RBP18.58■□□□□ 0.56
SSR1-204ENST00000474597 OR2T29Q8NH02 315 aa18.58■□□□□ 0.56
SSR1-204ENST00000474597 OR5K1Q8NHB7 308 aa18.58■□□□□ 0.56
SSR1-204ENST00000474597 MAGEE2Q8TD90 523 aaPredicted RBP18.58■□□□□ 0.56
SSR1-204ENST00000474597 OTUB1Q96FW1 271 aaPredicted RBP18.58■□□□□ 0.56
SSR1-204ENST00000474597 OR7D2Q96RA2 312 aa18.58■□□□□ 0.56
SSR1-204ENST00000474597 ACTRT3Q9BYD9 372 aa18.58■□□□□ 0.56
SSR1-204ENST00000474597 ZNF768Q9H5H4 540 aaKnown RBP18.58■□□□□ 0.56
SSR1-204ENST00000474597 SYNDIG1Q9H7V2 258 aa18.58■□□□□ 0.56
SSR1-204ENST00000474597 NDOR1Q9UHB4 597 aa18.58■□□□□ 0.56
SSR1-204ENST00000474597 SERTAD3Q9UJW9 196 aa18.58■□□□□ 0.56
SSR1-204ENST00000474597 LY6G6EA0A0G2JKS1 128 aa18.57■□□□□ 0.56
SSR1-204ENST00000474597 CLDN4O14493 209 aa18.57■□□□□ 0.56
SSR1-204ENST00000474597 DENRO43583 198 aaKnown RBP18.57■□□□□ 0.56
SSR1-204ENST00000474597 SLITRK5O94991 958 aa18.57■□□□□ 0.56
SSR1-204ENST00000474597 NELFEP18615 380 aaKnown RBP18.57■□□□□ 0.56
SSR1-204ENST00000474597 ARHGDIAP52565 204 aa18.57■□□□□ 0.56
SSR1-204ENST00000474597 DAB2P98082 770 aa18.57■□□□□ 0.56
SSR1-204ENST00000474597 SLC13A2Q13183 592 aa18.57■□□□□ 0.56
SSR1-204ENST00000474597 SYPL1Q16563 259 aa18.57■□□□□ 0.56
SSR1-204ENST00000474597 ATAD3BQ5T9A4 648 aa18.57■□□□□ 0.56
SSR1-204ENST00000474597 PIWIL3Q7Z3Z3 882 aaKnown RBP18.57■□□□□ 0.56
SSR1-204ENST00000474597 KRT73Q86Y46 540 aa18.57■□□□□ 0.56
SSR1-204ENST00000474597 ARMC8Q8IUR7 673 aa18.57■□□□□ 0.56
SSR1-204ENST00000474597 ZNF595Q8IYB9 648 aa18.57■□□□□ 0.56
SSR1-204ENST00000474597 SMYD1Q8NB12 490 aa18.57■□□□□ 0.56
SSR1-204ENST00000474597 ANKRD9Q96BM1 317 aaPredicted RBP18.57■□□□□ 0.56
SSR1-204ENST00000474597 C16orf58Q96GQ5 468 aa18.57■□□□□ 0.56
SSR1-204ENST00000474597 RUBCNLQ9H714 662 aa18.57■□□□□ 0.56
SSR1-204ENST00000474597 NTMQ9P121 344 aa18.57■□□□□ 0.56
SSR1-204ENST00000474597 ATXN7L1Q9ULK2 861 aaPredicted RBP18.57■□□□□ 0.56
SSR1-204ENST00000474597 U3KQA8 63 aa18.57■□□□□ 0.56
SSR1-204ENST00000474597 DUXAA6NLW8 204 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 TOX3O15405 576 aaPredicted RBP18.56■□□□□ 0.56
SSR1-204ENST00000474597 ASNA1O43681 348 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 OR10H2O60403 315 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 RPLP0P05388 317 aaKnown RBP18.56■□□□□ 0.56
SSR1-204ENST00000474597 FOLR1P15328 257 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 ALAS2P22557 587 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 ITGA1P56199 1179 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 STX4Q12846 297 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 GPAT3Q53EU6 434 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 ZNF628Q5EBL2 1059 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 FAM111BQ6SJ93 734 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 TTLL10Q6ZVT0 673 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 OR2L13Q8N349 312 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 ADAMTS15Q8TE58 950 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 RASSF5Q8WWW0 418 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 GEMIN6Q8WXD5 167 aaKnown RBP18.56■□□□□ 0.56
SSR1-204ENST00000474597 NR1H4Q96RI1 486 aaPredicted RBP18.56■□□□□ 0.56
SSR1-204ENST00000474597 PRTFDC1Q9NRG1 225 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 PADI2Q9Y2J8 665 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 CCDC88CQ9P219 2028 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 PCDHGA12O60330 932 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 SERPINB7O75635 380 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 CPNE6O95741 557 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 IST1P53990 364 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 CCL7P80098 99 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 SQSTM1Q13501 440 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 SYT16Q17RD7 645 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 HIPK1Q86Z02 1210 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 OR51Q1Q8NH59 317 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 BBS10Q8TAM1 723 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 TREX2Q9BQ50 279 aaPredicted RBP18.56■□□□□ 0.56
SSR1-204ENST00000474597 NDC1Q9BTX1 674 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 EXD2Q9NVH0 621 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 U3KQV3 271 aa18.56■□□□□ 0.56
SSR1-204ENST00000474597 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 CASC3O15234 703 aaKnown RBP18.55■□□□□ 0.56
SSR1-204ENST00000474597 CDC123O75794 336 aaPredicted RBP18.55■□□□□ 0.56
SSR1-204ENST00000474597 DIRAS1O95057 198 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 AGR2O95994 175 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 SLC35E2P0CK97 266 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 ATXN8OSP0DMR3 200 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 ITGA2P17301 1181 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 ALDH3A2P51648 485 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 MAPK10P53779 464 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 ARSFP54793 590 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 DAG1Q14118 895 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 PDK3Q15120 406 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 TRMT12Q53H54 448 aaKnown RBP18.55■□□□□ 0.56
SSR1-204ENST00000474597 MFSD12Q6NUT3 480 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 TBPL2Q6SJ96 375 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 OR1L3Q8NH93 324 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 ZNF675Q8TD23 568 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 MVB12AQ96EY5 273 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 GIMAP5Q96F15 307 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 C7orf34Q96L11 122 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 CNBD2Q96M20 576 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 COL21A1Q96P44 957 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 SPATA5L1Q9BVQ7 753 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 YIPF2Q9BWQ6 316 aa18.55■□□□□ 0.56
SSR1-204ENST00000474597 LRRN3Q9H3W5 708 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms