RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 HMGN4O00479 90 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 SCO2O43819 266 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 NME6O75414 186 aaPredicted RBP19.97■□□□□ 0.79
COL18A1-207ENST00000473212 IL1AP01583 271 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 ALPPL2P10696 532 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 MAPK12P53778 367 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 RNLSQ5VYX0 342 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 XKRXQ6PP77 449 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 FAM129CQ86XR2 697 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 OR5P2Q8WZ92 322 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 SLC7A6Q92536 515 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 TM4SF18Q96CE8 201 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 PRR14Q9BWN1 585 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 RNF208Q9H0X6 261 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 KCNK12Q9HB15 430 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 LHX9Q9NQ69 397 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 TBX21Q9UL17 535 aa19.97■□□□□ 0.79
COL18A1-207ENST00000473212 PDPK1O15530 556 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 RAB36O95755 333 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 C6P13671 934 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 SDC2P34741 201 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 SYT14P1Q58G82 188 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 PODNL1Q6PEZ8 512 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 KIAA0907Q7Z7F0 614 aaPredicted RBP19.96■□□□□ 0.79
COL18A1-207ENST00000473212 C11orf96Q7Z7L8 435 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 FAM20CQ8IXL6 584 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 NUS1Q96E22 293 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 ZFYVE19Q96K21 471 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 MSLNLQ96KJ4 702 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 LRR1Q96L50 414 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 MACROD1Q9BQ69 325 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 DIMT1Q9UNQ2 313 aaKnown RBP19.96■□□□□ 0.79
COL18A1-207ENST00000473212 MYO10Q9HD67 2058 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 PRRT4C9JH25 899 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 TMPRSS11DO60235 418 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 PAPLNO95428 1278 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 LINC00271P0C7V0 271 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 GINS1Q14691 196 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 PYDC2Q56P42 97 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 ACSM5Q6NUN0 579 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 GPA33Q99795 319 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 FUZQ9BT04 418 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 SAGE1Q9NXZ1 904 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 A4GNTQ9UNA3 340 aa19.96■□□□□ 0.79
COL18A1-207ENST00000473212 CENPBD1B2RD01 187 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 B4DXG7 233 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 H7BY64 318 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 SLC28A2O43868 658 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 PDE9AO76083 593 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 ADH1AP07327 375 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 TSPAN19P0C672 248 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 CPEP16870 476 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 MNX1P50219 401 aaPredicted RBP19.95■□□□□ 0.78
COL18A1-207ENST00000473212 HOXC5Q00444 222 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 OR2G6Q5TZ20 316 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 SPRED2Q7Z698 418 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 FAM26EQ8N5C1 309 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 CAMKK1Q8N5S9 505 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 CLDN22Q8N7P3 220 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 SYT14Q8NB59 555 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 UBE2E3Q969T4 207 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 RNF170Q96K19 258 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 PRAP1Q96NZ9 151 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 YIPF4Q9BSR8 244 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 GLOD5A6NK44 160 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 MYL9P24844 172 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 BSGP35613 385 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 RPS25P62851 125 aaKnown RBP19.95■□□□□ 0.78
COL18A1-207ENST00000473212 TRIM48Q8IWZ4 208 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 VWA5B2Q8N398 1253 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 UBASH3BQ8TF42 649 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 C1GALT1C1Q96EU7 318 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 ZNF582Q96NG8 517 aaPredicted RBP19.95■□□□□ 0.78
COL18A1-207ENST00000473212 GDF15Q99988 308 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 POLDIP3Q9BY77 421 aaKnown RBP19.95■□□□□ 0.78
COL18A1-207ENST00000473212 MCOLN1Q9GZU1 580 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 DKK3Q9UBP4 350 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 TESQ9UGI8 421 aaKnown RBP19.95■□□□□ 0.78
COL18A1-207ENST00000473212 ACAD8Q9UKU7 415 aa19.95■□□□□ 0.78
COL18A1-207ENST00000473212 A0A0B4J293 547 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 TRAPPC2P0DI81 140 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 TRAPPC2BP0DI82 140 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 OR12D1P0DN82 309 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 MMP11P24347 488 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 CD83Q01151 205 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 GPAT3Q53EU6 434 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 SLC35F1Q5T1Q4 408 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 ZER1Q7Z7L7 766 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 NOXA1Q86UR1 476 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 RDH10Q8IZV5 341 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 IL17RCQ8NAC3 791 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 RNF31Q96EP0 1072 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 ZNF607Q96SK3 696 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 TREX2Q9BQ50 279 aaPredicted RBP19.94■□□□□ 0.78
COL18A1-207ENST00000473212 PAK6Q9NQU5 681 aaPredicted RBP19.94■□□□□ 0.78
COL18A1-207ENST00000473212 TOR4AQ9NXH8 423 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 LZTS3O60299 673 aaPredicted RBP19.94■□□□□ 0.78
COL18A1-207ENST00000473212 LGI1O95970 557 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 GPC1P35052 558 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 KIR2DL3P43628 341 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms