RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 PROS1P07225 676 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 CA3P07451 260 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 PABPC4LP0CB38 370 aaKnown RBP3.45□□□□□ -1.86
ITGB1-208ENST00000464001 RALBP11234 206 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 KRT3P12035 628 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 B4GALT1P15291 398 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 TNNI3P19429 210 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 CHMLP26374 656 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 ELAVL4P26378 380 aaKnown RBP3.45□□□□□ -1.86
ITGB1-208ENST00000464001 MAGEA1P43355 309 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 NSFP46459 744 aaKnown RBP3.45□□□□□ -1.86
ITGB1-208ENST00000464001 SLC11A1P49279 550 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 PGFP49763 221 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 RGS4P49798 205 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 PDX1P52945 283 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 SUCLG1P53597 346 aaKnown RBP3.45□□□□□ -1.86
ITGB1-208ENST00000464001 AP3M2P53677 418 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 NUCB2P80303 420 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 BST1Q10588 318 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 PNRC1Q12796 327 aaPredicted RBP3.45□□□□□ -1.86
ITGB1-208ENST00000464001 PTGISQ16647 500 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 FAM46CQ5VWP2 391 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 SUSD4Q5VX71 490 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 LYSMD4Q5XG99 296 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 FAM166AQ6J272 317 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 ZNF343Q6P1L6 599 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 NANOGNBQ7Z5D8 188 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 CDR2LQ86X02 465 aaPredicted RBP3.45□□□□□ -1.86
ITGB1-208ENST00000464001 GCNT2Q8N0V5 402 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 THEM5Q8N1Q8 247 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 PRSS33Q8NF86 280 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 RAB3IL1Q8TBN0 382 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 SLC22A8Q8TCC7 542 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 RASL10AQ92737 203 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 OSTF1Q92882 214 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 DHX58Q96C10 678 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 C19orf60Q96EN9 201 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 NRBF2Q96F24 287 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 DHTKD1Q96HY7 919 aaPredicted RBP3.45□□□□□ -1.86
ITGB1-208ENST00000464001 IFT74Q96LB3 600 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 RIOK1Q9BRS2 568 aaKnown RBP3.45□□□□□ -1.86
ITGB1-208ENST00000464001 ALG12Q9BV10 488 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 LRRCC1Q9C099 1032 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 MAGT1Q9H0U3 335 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 HAUS4Q9H6D7 363 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 WDR76Q9H967 626 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 PANK3Q9H999 370 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 CDH20Q9HBT6 801 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 EXOC1Q9NV70 894 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 COPS7AQ9UBW8 275 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 EPHA6Q9UF33 1036 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 PPP1R3CQ9UQK1 317 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 MRPS33Q9Y291 106 aaKnown RBP3.45□□□□□ -1.86
ITGB1-208ENST00000464001 GRIP1Q9Y3R0 1128 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.45□□□□□ -1.86
ITGB1-208ENST00000464001 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
ITGB1-208ENST00000464001 SF3B1O75533 1304 aaKnown RBP eCLIP3.44□□□□□ -1.86
ITGB1-208ENST00000464001 BRD4O60885 1362 aaPredicted RBP3.44□□□□□ -1.86
ITGB1-208ENST00000464001 A0A0U1RQS6 177 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 A0A1B0GTQ1 180 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 A0A1W2PNU3 283 aaPredicted RBP3.44□□□□□ -1.86
ITGB1-208ENST00000464001 ARHGEF35A5YM69 484 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 BTBD17A6NE02 478 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 ACOD1A6NK06 481 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 NDUFS8O00217 210 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 SOCS3O14543 225 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 ZNF264O43296 627 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 ZNF208O43345 1280 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 AKR7A2O43488 359 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 ECE2O60344 883 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 ZNF254O75437 659 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 STBD1O95210 358 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 FGFR1OPO95684 399 aaKnown RBP3.44□□□□□ -1.86
ITGB1-208ENST00000464001 OTCP00480 354 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 IGHV2-70P01814 119 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 SMIM18P0DKX4 95 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 RRASP10301 218 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 SAGP10523 405 aaPredicted RBP3.44□□□□□ -1.86
ITGB1-208ENST00000464001 NCF2P19878 526 aaPredicted RBP3.44□□□□□ -1.86
ITGB1-208ENST00000464001 HNF1AP20823 631 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 MARCKSP29966 332 aaPredicted RBP3.44□□□□□ -1.86
ITGB1-208ENST00000464001 PRDX2P32119 198 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 MMP12P39900 470 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 PAX9P55771 341 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 GSCP56915 257 aaPredicted RBP3.44□□□□□ -1.86
ITGB1-208ENST00000464001 DMPKQ09013 629 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 DNAJC3Q13217 504 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 VEZF1Q14119 521 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 NR1D2Q14995 579 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 KRT31Q15323 416 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 CMPK2Q5EBM0 449 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 C20orf194Q5TEA3 1177 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 ATF7IP2Q5U623 682 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 AGAP6Q5VW22 663 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 ASPHD2Q6ICH7 369 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 GPRIN3Q6ZVF9 776 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 PAQR9Q6ZVX9 377 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 TMPRSS11FQ6ZWK6 438 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 OFCC1Q8IZS5 231 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 Q8N377 158 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms