RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 MLLT3P42568 568 aaPredicted RBP14.61□□□□□ -0.07
LMNB1-203ENST00000460265 EPHA5P54756 1037 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 CDC42P60953 191 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 ACTR1AP61163 376 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 BNC1Q01954 994 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 ARMCX4Q5H9R4 360 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 SYT6Q5T7P8 510 aaPredicted RBP14.61□□□□□ -0.07
LMNB1-203ENST00000460265 OR52N2Q8NGI0 321 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 TTC9Q92623 222 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 DPH7Q9BTV6 452 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 BHLHE41Q9C0J9 482 aaPredicted RBP14.61□□□□□ -0.07
LMNB1-203ENST00000460265 MMP28Q9H239 520 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 ANKRA2Q9H9E1 313 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 SIRT5Q9NXA8 310 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 TEX10Q9NXF1 929 aaPredicted RBP14.61□□□□□ -0.07
LMNB1-203ENST00000460265 GPR83Q9NYM4 423 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 TMEFF2Q9UIK5 374 aaPredicted RBP14.61□□□□□ -0.07
LMNB1-203ENST00000460265 BTNL2Q9UIR0 455 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 NUP50Q9UKX7 468 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 SCN2BO60939 215 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 STSP08842 583 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 PTPN6P29350 595 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 KCTD20Q7Z5Y7 419 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 PLPP6Q8IY26 295 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 GPR65Q8IYL9 337 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 CACTIN-AS1Q8N1I8 211 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 CXorf40BQ96DE9 158 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 ZBED6CLQ96FA7 236 aaPredicted RBP14.61□□□□□ -0.07
LMNB1-203ENST00000460265 MN1Q10571 1320 aaPredicted RBP14.61□□□□□ -0.07
LMNB1-203ENST00000460265 RNASET2O00584 256 aaKnown RBP14.61□□□□□ -0.07
LMNB1-203ENST00000460265 CAPN5O15484 640 aaPredicted RBP14.61□□□□□ -0.07
LMNB1-203ENST00000460265 AK4P27144 223 aaPredicted RBP14.61□□□□□ -0.07
LMNB1-203ENST00000460265 ID2Q02363 134 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 MTAPQ13126 283 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 VEZF1Q14119 521 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 ZNF750Q32MQ0 723 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 ZNF542PQ5EBM4 170 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 TOR2AQ5JU69 321 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 REEP3Q6NUK4 255 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 SLC9B2Q86UD5 537 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 PDZD3Q86UT5 571 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 UBE2J2Q8N2K1 259 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 SLC9A6Q92581 669 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 TMCO6Q96DC7 493 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 TMEM19Q96HH6 336 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 KCNS3Q9BQ31 491 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 CXorf36Q9H7Y0 433 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 MARK1Q9P0L2 795 aa14.61□□□□□ -0.07
LMNB1-203ENST00000460265 PRAMEF10O60809 474 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 APOL3O95236 402 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 LAIR2Q6ISS4 152 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 OR8H1Q8NGG4 311 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 INSM2Q96T92 566 aaPredicted RBP14.6□□□□□ -0.07
LMNB1-203ENST00000460265 NIPSNAP1Q9BPW8 284 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 FNDC11Q9BVV2 318 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 TIGARQ9NQ88 270 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 ATPIF1Q9UII2 106 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 FBXO10Q9UK96 956 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 NEUROG3Q9Y4Z2 214 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 HSPB11Q9Y547 144 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 ALPK2Q86TB3 2170 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 TEX51A0A1B0GUA7 166 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 ZNF860A6NHJ4 632 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 PLPP1O14494 284 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 SHOXO15266 292 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 CCNYL3P0C7X3 344 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 MASP1P48740 699 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 SLC9A5Q14940 896 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 BTBD16Q32M84 506 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 DCST1Q5T197 706 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 KRT73Q86Y46 540 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 SLC34A3Q8N130 599 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 GEMIN6Q8WXD5 167 aaKnown RBP14.6□□□□□ -0.07
LMNB1-203ENST00000460265 UCN3Q969E3 161 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 FCRL4Q96PJ5 515 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 ZNF607Q96SK3 696 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 FAIM2Q9BWQ8 316 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 DPEP2Q9H4A9 486 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 COL4A6Q14031 1691 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 CCDC182A6NF36 153 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 PLD2O14939 933 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 OR2B3O76000 313 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 KRT20P35900 424 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 PRKCDQ05655 676 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 OR4N5Q8IXE1 308 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 TSACCQ96A04 125 aaPredicted RBP14.6□□□□□ -0.07
LMNB1-203ENST00000460265 MSANTD3Q96H12 275 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 ACOT13Q9NPJ3 140 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 TVP23BQ9NYZ1 205 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 NDUFAF4Q9P032 175 aa14.6□□□□□ -0.07
LMNB1-203ENST00000460265 CTDSP2O14595 271 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 NPC1O15118 1278 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 AKR7A2O43488 359 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 PCDHGA12O60330 932 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 PDGFAP04085 211 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 ANXA8P13928 327 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 GADD45AP24522 165 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 SOX6P35712 828 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 PIN1Q13526 163 aaPredicted RBP14.59□□□□□ -0.07
LMNB1-203ENST00000460265 IRF4Q15306 451 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms