RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 MAPK11Q15759 364 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 ZIC1Q15915 447 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 EIPR1Q53HC9 387 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 TCEAL5Q5H9L2 206 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 ARMC4Q5T2S8 1044 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 STEAP3Q658P3 488 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 ZNF544Q6NX49 715 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 SLC27A4Q6P1M0 643 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 HSDL2Q6YN16 418 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 Q6ZPB1 254 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-202ENST00000459727 RRM2BQ7LG56 351 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 ADCK2Q7Z695 626 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 MRGPREQ86SM8 312 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 C12orf40Q86WS4 652 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 MMAAQ8IVH4 418 aaKnown RBP8.36□□□□□ -1.07
HDAC3-202ENST00000459727 SLC34A3Q8N130 599 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 ZNF366Q8N895 744 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 ANKRD53Q8N9V6 530 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 OR2L5Q8NG80 312 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 PIGXQ8TBF5 258 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 ING5Q8WYH8 240 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 PMM1Q92871 262 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 OSTF1Q92882 214 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 NXPE3Q969Y0 559 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 SLC22A18Q96BI1 424 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 OPALINQ96PE5 141 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 FERD3LQ96RJ6 166 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 DPH7Q9BTV6 452 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 CENPOQ9BU64 300 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 TSSK6Q9BXA6 273 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 ASPNQ9BXN1 380 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 OR51E2Q9H255 320 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 OR51I1Q9H343 314 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 GLIPR2Q9H4G4 154 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 AMBNQ9NP70 447 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 MRPS30Q9NP92 439 aaKnown RBP8.36□□□□□ -1.07
HDAC3-202ENST00000459727 FGF20Q9NP95 211 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-202ENST00000459727 C11orf16Q9NQ32 467 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 PHF11Q9UIL8 331 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 LSM2Q9Y333 95 aaKnown RBP8.36□□□□□ -1.07
HDAC3-202ENST00000459727 BPTFQ12830 3046 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 DENND4AQ7Z401 1863 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 A0A1W2PPV9 198 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 URADA6NGE7 173 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 H7BY64 318 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 MAN2B1O00754 1011 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 AP3D1O14617 1153 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 SLC30A4O14863 429 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 AXIN1O15169 862 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 DYRK3O43781 588 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 TMPRSS11DO60235 418 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 RECKO95980 971 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 APODP05090 189 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 ALPPP05187 535 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 EPHX1P07099 455 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 HOXC4P09017 264 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-202ENST00000459727 TSPAN19P0C672 248 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 OR12D1P0DN82 309 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 ACP2P11117 423 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 CPEP16870 476 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 STAT5AP42229 794 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 WNT4P56705 351 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 CDK5Q00535 292 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 BNC1Q01954 994 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 RGS1Q08116 209 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 TSPAN31Q12999 210 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 SGCGQ13326 291 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 DNASE1L3Q13609 305 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 ENPP2Q13822 863 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 CEBPEQ15744 281 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 CST6Q15828 149 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 WSCD2Q2TBF2 565 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 INAVAQ3KP66 663 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 MINDY4Q4G0A6 757 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 RPS26P11Q5JNZ5 115 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-202ENST00000459727 ZNF776Q68DI1 518 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-202ENST00000459727 MRM1Q6IN84 353 aaKnown RBP8.35□□□□□ -1.07
HDAC3-202ENST00000459727 RPL13AP3Q6NVV1 102 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 PODNL1Q6PEZ8 512 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 TMC5Q6UXY8 1006 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 TMPRSS11AQ6ZMR5 421 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 RASSF6Q6ZTQ3 369 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 GET4Q7L5D6 327 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-202ENST00000459727 ADGRD2Q7Z7M1 963 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 LAPTM4BQ86VI4 370 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 YAF2Q8IY57 180 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 SLC43A2Q8N370 569 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 GDPD1Q8N9F7 314 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 MFSD9Q8NBP5 474 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 OR4K5Q8NGD3 323 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 VANGL1Q8TAA9 524 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-202ENST00000459727 TMEM163Q8TC26 289 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 SLC7A13Q8TCU3 470 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 CREB3L4Q8TEY5 395 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 XAGE5Q8WWM1 108 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 ASB12Q8WXK4 309 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 MYLIPQ8WY64 445 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 HERVK_113Q902F9 699 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 UFD1Q92890 307 aa8.35□□□□□ -1.07
HDAC3-202ENST00000459727 HPS1Q92902 700 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms