RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 TEX264Q9Y6I9 313 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 A0A1W2PPR1 153 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 SH3D21A4FU49 640 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 KIAA1324LA8MWY0 1029 aaPredicted RBP13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 SMPD2O60906 423 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 S100BP04271 92 aaPredicted RBP13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 CYP4B1P13584 511 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 PCSK6P29122 969 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 BUD31P41223 144 aaPredicted RBP13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 CASP2P42575 452 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 TMED10P49755 219 aaKnown RBP13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 RAP1GDS1P52306 607 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 MORF4L2Q15014 288 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 EIPR1Q53HC9 387 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 HLA-DQA1Q5Y7H0 255 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 C18orf63Q68DL7 685 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 BICRALQ6AI39 1079 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 TREML4Q6UXN2 200 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 TMEM64Q6YI46 380 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 LRRC75A-AS1Q8N1F1 130 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 C9orf106Q8NAJ2 232 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 LRRN4CLQ8ND94 238 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 SPPL2AQ8TCT8 520 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 ZPLD1Q8TCW7 415 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 ACTRT1Q8TDG2 376 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 TP53INP1Q96A56 240 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 RGMAQ96B86 450 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 COX4I2Q96KJ9 171 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 SECISBP2Q96T21 854 aaKnown RBP13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 CENPKQ9BS16 269 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 SFXN3Q9BWM7 321 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 SORBS1Q9BX66 1292 aaKnown RBP13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 ANGPTL4Q9BY76 406 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 RHOJQ9H4E5 214 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 SNX15Q9NRS6 342 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 TEX10Q9NXF1 929 aaPredicted RBP13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 NSMCE4AQ9NXX6 385 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 GALNT8Q9NY28 637 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 JMJD1CQ15652 2540 aa13.1□□□□□ -0.31
UPF3AP2-201ENST00000457924 H7C1Q1 480 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 PRKRAO75569 313 aaKnown RBP13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 GPR75O95800 540 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 CCDC166P0CW27 439 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 EPORP19235 508 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 GCKP35557 465 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 NRG3P56975 720 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 ATP6V0D1P61421 351 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 POU4F1Q01851 419 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 PCDH1Q08174 1060 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 ILF2Q12905 390 aaKnown RBP13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 E2F2Q14209 437 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 SETDB1Q15047 1291 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 WIPI1Q5MNZ9 446 aaPredicted RBP13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 DCST1Q5T197 706 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 DEPDC1Q5TB30 811 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 CAPN12Q6ZSI9 719 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 LRRC70Q7Z2Q7 622 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 LUZP2Q86TE4 346 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 GAS2L3Q86XJ1 694 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 LAS2Q8IYD9 372 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 ZCCHC7Q8N3Z6 543 aaKnown RBP13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 ZNF441Q8N8Z8 693 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 PDPRQ8NCN5 879 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 SIMC1Q8NDZ2 872 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 PIGTQ969N2 578 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 NTNG2Q96CW9 530 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 ZFP3Q96NJ6 502 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 PIP5K1AQ99755 562 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 TM9SF2Q99805 663 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 BDH2Q9BUT1 245 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 CD244Q9BZW8 370 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 OR51B5Q9H339 312 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 NDRG3Q9UGV2 375 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 ADGRE2Q9UHX3 823 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 PTBP2Q9UKA9 531 aaKnown RBP13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 NPFFR2Q9Y5X5 522 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 ARID1AO14497 2285 aa13.09□□□□□ -0.31
UPF3AP2-201ENST00000457924 SMAD7O15105 426 aaKnown RBP13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 CDH16O75309 829 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 ACTL6AO96019 429 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 CD1DP15813 335 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 GALNSP34059 522 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 CASP3P42574 277 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 NAGLUP54802 743 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 HNRNPH2P55795 449 aaKnown RBP13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 ARL4CP56559 192 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 FOXF2Q12947 444 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 DDX39BQ13838 428 aaKnown RBP13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 OR4D1Q15615 310 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 FNDC7Q5VTL7 733 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 CIARTQ8N365 385 aaPredicted RBP13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 OR7G3Q8NG95 312 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 TSPAN17Q96FV3 270 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 TMEM41AQ96HV5 264 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 Q96MF0 132 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 DDX47Q9H0S4 455 aaKnown RBP13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 ACBD3Q9H3P7 528 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 PIGMQ9H3S5 423 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 CAB39LQ9H9S4 337 aa13.08□□□□□ -0.32
UPF3AP2-201ENST00000457924 WDR41Q9HAD4 459 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms