RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 PHYHO14832 338 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ARPC1BO15143 372 aaKnown RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 SHOXO15266 292 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 SEC14L5O43304 696 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 HPGDSO60760 199 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 TBL1XO60907 577 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 RGS11O94810 467 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 AKAIN1P0CW23 69 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CD8BP10966 210 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 UBL4AP11441 157 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 NDUFV2P19404 249 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CDK2P24941 298 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 C21orf33P30042 268 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CCND3P30281 292 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 TIA1P31483 386 aaKnown RBP eCLIP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 GPR1P46091 355 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CCR4P51679 360 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 HCCSP53701 268 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CLDN20P56880 219 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CAMK2BQ13554 666 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 FLYWCH1Q4VC44 716 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 UBXN11Q5T124 520 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 HENMT1Q5T8I9 393 aaKnown RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 HIST2H3PS2Q5TEC6 136 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 AADACL4Q5VUY2 407 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 SYPL2Q5VXT5 272 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 UQCC3Q6UW78 93 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CLEC20AQ6ZU45 233 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 RPS27LQ71UM5 84 aaKnown RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CEP68Q76N32 757 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 KCTD9Q7L273 389 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF546Q86UE3 836 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 PNLDC1Q8NA58 520 aaKnown RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 OR10Q1Q8NGQ4 319 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 RNF141Q8WVD5 230 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 GIMAP1Q8WWP7 306 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CPNE2Q96FN4 548 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 LRRC46Q96FV0 321 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ADAD1Q96M93 576 aaKnown RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 NSUN5Q96P11 429 aaKnown RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 OSGEPL1Q9H4B0 414 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 DPEP3Q9H4B8 488 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ZDHHC6Q9H6R6 413 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 EVA1AQ9H8M9 152 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ELP3Q9H9T3 547 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 RDH14Q9HBH5 336 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 HMX1Q9NP08 348 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CTPS2Q9NRF8 586 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 MED17Q9NVC6 651 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 OR6C2Q9NZP2 312 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 C4AP0C0L4 1744 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 C4BP0C0L5 1744 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 PEAK1Q9H792 1746 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 LOC100509620A0A075B734 347 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 TRAV19A0A0A6YYK7 116 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CDHR4A6H8M9 788 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 MROH6A6NGR9 719 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 TOR1AO14656 332 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CAPNS1P04632 268 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CSN2P05814 226 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF286BP0CG31 522 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ACP2P11117 423 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF35P13682 527 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CHATP28329 748 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 PTPN6P29350 595 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 PRSS3P35030 304 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 GNALP38405 381 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 THPOP40225 353 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 KCNC1P48547 511 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 PER3P56645 1201 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 VSX2P58304 361 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ARFRP1Q13795 201 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ATXN7L3Q14CW9 347 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 RNASE10Q5GAN6 216 aaKnown RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 KDM4DQ6B0I6 523 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 DNM1P34Q6PK57 102 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 HIST2H3AQ71DI3 136 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 PHYKPLQ8IUZ5 450 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 LAX1Q8IWV1 398 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 LSMEM2Q8N112 164 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 UMODL1-AS1Q8N2C9 162 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 KCT2Q8NC54 265 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ANKK1Q8NFD2 765 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 SUN3Q8TAQ9 357 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CLEC4CQ8WTT0 213 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CHTF18Q8WVB6 975 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 MYLIPQ8WY64 445 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 C7orf34Q96L11 122 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CDCA4Q9BXL8 241 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 BCL2L14Q9BZR8 327 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 NMNAT1Q9HAN9 279 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ELL3Q9HB65 397 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 THSD1Q9NS62 852 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 TMEM248Q9NWD8 314 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 VAPAQ9P0L0 249 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 DIMT1Q9UNQ2 313 aaKnown RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 SMCO3A2RU48 225 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 SMIM30A4D0T7 59 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 A6NL46 340 aa4.77□□□□□ -1.65
PCDH9-203ENST00000456367 H7C417 338 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms