RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 ABHD17CQ6PCB6 329 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 PODNL1Q6PEZ8 512 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 C2orf73Q8N5S3 287 aaPredicted RBP11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 FAM181AQ8N9Y4 354 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 MS4A6EQ96DS6 147 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 SCARF2Q96GP6 870 aaPredicted RBP11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 ARHGDIGQ99819 225 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 TSSK6Q9BXA6 273 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 C1QTNF2Q9BXJ5 285 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 C6orf62Q9GZU0 229 aaPredicted RBP11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 WDR26Q9H7D7 661 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 PRDM9Q9NQV7 894 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 QPCTLQ9NXS2 382 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 CALML5Q9NZT1 146 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 NTMQ9P121 344 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 STUB1Q9UNE7 303 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 SLC17A4Q9Y2C5 497 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 IQCMA0A1B0GVH7 501 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 FAM227AF5H4B4 570 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 STK25O00506 426 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 TPST2O60704 377 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 ATP6V1G1O75348 118 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 NME6O75414 186 aaPredicted RBP11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 EPHX1P07099 455 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 FHP07954 510 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 NR2F1P10589 423 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 HIST1H1TP22492 207 aaPredicted RBP11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 MMP11P24347 488 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 BCL6P41182 706 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 GIPRP48546 466 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 PCYT1AP49585 367 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 GAS1P54826 345 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 DEFA1P59665 94 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 DEFA3P59666 94 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 FUT5Q11128 374 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 MED22Q15528 200 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 CST6Q15828 149 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 LEXMQ3ZCV2 418 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 KLHL22Q53GT1 634 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 SPANXN2Q5MJ10 180 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 DEF8Q6ZN54 512 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 ZER1Q7Z7L7 766 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 TRIM73Q86UV7 250 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 RBM45Q8IUH3 476 aaKnown RBP11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 SFTPA1Q8IWL2 248 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 AMER3Q8N944 861 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 OR2L5Q8NG80 312 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 OR4K5Q8NGD3 323 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 ZFYVE19Q96K21 471 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 C12orf66Q96MD2 445 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 SDHCQ99643 169 aaPredicted RBP11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 MED18Q9BUE0 208 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 FNDC11Q9BVV2 318 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 BTBD1Q9H0C5 482 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 SFXN1Q9H9B4 322 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 C11orf16Q9NQ32 467 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 ABCB10Q9NRK6 738 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 TM7SF3Q9NS93 570 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 ZCCHC3Q9NUD5 404 aaKnown RBP11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 TAS2R16Q9NYV7 291 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 NPAP1Q9NZP6 1156 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 KLHL3Q9UH77 587 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 LIPT1Q9Y234 373 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 SNX11Q9Y5W9 270 aa11.81□□□□□ -0.52
ECHDC1-209ENST00000454591 TMEM129A0AVI4 362 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 TBC1D3BA6NDS4 549 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 TBX1O43435 398 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 KDM1AO60341 852 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 KCNK2O95069 426 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 RAB36O95755 333 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 IL1AP01583 271 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 CHRM4P08173 479 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 HBQ1P09105 142 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 CPEP16870 476 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 ATP5A1P25705 553 aaKnown RBP11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 PSMA1P25786 263 aaKnown RBP11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 POU1F1P28069 291 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 GJA4P35212 333 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 SMSP52788 366 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 TARDBPQ13148 414 aaKnown RBP eCLIP11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 RUNX3Q13761 415 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 C1DQ13901 141 aaKnown RBP11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 IRF4Q15306 451 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 TMEM44Q2T9K0 475 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 SOWAHCQ53LP3 525 aaPredicted RBP11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 SYT14P1Q58G82 188 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 ZNF425Q6IV72 752 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 SLC48A1Q6P1K1 146 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 COMTD1Q86VU5 262 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 CLDN22Q8N7P3 220 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 POC5Q8NA72 575 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 MFSD9Q8NBP5 474 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 ST13P5Q8NFI4 369 aaPredicted RBP11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 TOR1AIP2Q8NFQ8 470 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 GNPDA2Q8TDQ7 276 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 XAGE5Q8WWM1 108 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 ASB12Q8WXK4 309 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 FGF13Q92913 245 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 FERD3LQ96RJ6 166 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms