RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 VWA5B2Q8N398 1253 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 OR7G1Q8NGA0 311 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.43□□□□□ -0.26
HSPG2-207ENST00000453796 PHF3Q92576 2039 aaKnown RBP13.43□□□□□ -0.26
HSPG2-207ENST00000453796 KLHL29Q96CT2 875 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 MAGED4Q96JG8 741 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 FAM173AQ9BQD7 235 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 TMEM109Q9BVC6 243 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 GATA5Q9BWX5 397 aaPredicted RBP13.43□□□□□ -0.26
HSPG2-207ENST00000453796 PARD6BQ9BYG5 372 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 TTTY12Q9BZ98 90 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 ZDHHC11Q9H8X9 412 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 PROK2Q9HC23 129 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 SACM1LQ9NTJ5 587 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 SLC17A7Q9P2U7 560 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 PSME2Q9UL46 239 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 DTX4Q9Y2E6 619 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 CHCHD2Q9Y6H1 151 aaPredicted RBP13.43□□□□□ -0.26
HSPG2-207ENST00000453796 C2orf92A0A1B0GVN3 265 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 NPIPB8E9PQR5 432 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 G3V3Y1 287 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 TRIM13O60858 407 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 CBX7O95931 251 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 P04436 131 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 UROSP10746 265 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 GPX3P22352 226 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 DEKP35659 375 aaKnown RBP13.42□□□□□ -0.26
HSPG2-207ENST00000453796 GSTM5P46439 218 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 DNASE1L1P49184 302 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 ALDH9A1P49189 494 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 BTKQ06187 659 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 IFFO1Q0D2I5 559 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 LTB4RQ15722 352 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 CEBPEQ15744 281 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 HYAL4Q2M3T9 481 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 SLC22A10Q63ZE4 541 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 GK5Q6ZS86 529 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 RNF165Q6ZSG1 346 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 LRRC25Q8N386 305 aaPredicted RBP13.42□□□□□ -0.26
HSPG2-207ENST00000453796 SIMC1Q8NDZ2 872 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 C17orf47Q8NEP4 570 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 ITLN2Q8WWU7 325 aaPredicted RBP13.42□□□□□ -0.26
HSPG2-207ENST00000453796 FAM111AQ96PZ2 611 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 EBPLQ9BY08 206 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 SHCBP1LQ9BZQ2 653 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 SH3BGRL2Q9UJC5 107 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 UTS2RQ9UKP6 389 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 CNOT11Q9UKZ1 510 aaKnown RBP13.42□□□□□ -0.26
HSPG2-207ENST00000453796 RAB21Q9UL25 225 aa13.42□□□□□ -0.26
HSPG2-207ENST00000453796 CACNA1CQ13936 2221 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 A0A1B0GTH9 108 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 GNG14A0A1W2PPG7 69 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 RSL1D1O76021 490 aaKnown RBP13.41□□□□□ -0.26
HSPG2-207ENST00000453796 ANXA4P09525 319 aaPredicted RBP13.41□□□□□ -0.26
HSPG2-207ENST00000453796 CREB1P16220 341 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 ABOP16442 354 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 PRPH2P23942 346 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 COL8A1P27658 744 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 ALDH3A1P30838 453 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 PIGAP37287 484 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 PPIAP62937 165 aaKnown RBP13.41□□□□□ -0.26
HSPG2-207ENST00000453796 ADORA2A-AS1P86434 159 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 ZNF763Q0D2J5 394 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 HEPACAMQ14CZ8 416 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 EXOSC7Q15024 291 aaKnown RBP13.41□□□□□ -0.26
HSPG2-207ENST00000453796 KIAA0040Q15053 153 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 TRMT12Q53H54 448 aaKnown RBP13.41□□□□□ -0.26
HSPG2-207ENST00000453796 C6orf163Q5TEZ5 329 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 CLEC6AQ6EIG7 209 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 RGS9BPQ6ZS82 235 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 FAM47EQ6ZV65 393 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 DOLPP1Q86YN1 238 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 FBXW8Q8N3Y1 598 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 ADCY4Q8NFM4 1077 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 OR10G3Q8NGC4 313 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 FAM76AQ8TAV0 307 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 ZNF675Q8TD23 568 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 TCP10LQ8TDR4 215 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 NTNG2Q96CW9 530 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 PHF12Q96QT6 1004 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 TRMOQ9BU70 441 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 MECRQ9BV79 373 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 BRINP2Q9C0B6 783 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 IL1RL2Q9HB29 575 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 TUBA8Q9NY65 449 aaPredicted RBP13.41□□□□□ -0.26
HSPG2-207ENST00000453796 EHD3Q9NZN3 535 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 SUCOQ9UBS9 1254 aaKnown RBP13.41□□□□□ -0.26
HSPG2-207ENST00000453796 NPFFR2Q9Y5X5 522 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 ZNF780BQ9Y6R6 833 aa13.41□□□□□ -0.26
HSPG2-207ENST00000453796 CRYBG3Q68DQ2 2970 aa13.4□□□□□ -0.26
HSPG2-207ENST00000453796 CACNA1DQ01668 2161 aa13.4□□□□□ -0.26
HSPG2-207ENST00000453796 FAM166BA8MTA8 275 aa13.4□□□□□ -0.26
HSPG2-207ENST00000453796 ACOT7O00154 380 aa13.4□□□□□ -0.26
HSPG2-207ENST00000453796 ADAM10O14672 748 aa13.4□□□□□ -0.26
HSPG2-207ENST00000453796 TYROBPO43914 113 aa13.4□□□□□ -0.26
HSPG2-207ENST00000453796 CDC40O60508 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
HSPG2-207ENST00000453796 SPAG7O75391 227 aa13.4□□□□□ -0.26
HSPG2-207ENST00000453796 IGHG3P01860 377 aa13.4□□□□□ -0.26
HSPG2-207ENST00000453796 EMDP50402 254 aa13.4□□□□□ -0.26
HSPG2-207ENST00000453796 CASP6P55212 293 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms