RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 CCDC152Q4G0S7 254 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 PLPP4Q5VZY2 271 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 ZNF613Q6PF04 617 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 RFPL4BQ6ZWI9 263 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 CHMP1BQ7LBR1 199 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 GCNT2Q8N0V5 402 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 PARP8Q8N3A8 854 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 NUP37Q8NFH4 326 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 OR4D10Q8NGI6 311 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 P3H4Q92791 437 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 C4orf36Q96KX1 117 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 NSMCE3Q96MG7 304 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 EDEM2Q9BV94 578 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 TRIM6Q9C030 488 aaPredicted RBP3.96□□□□□ -1.78
USP25-206ENST00000453553 MED20Q9H944 212 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 VIPAS39Q9H9C1 493 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 C3orf14Q9HBI5 128 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 SPHK2Q9NRA0 654 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 LHX3Q9UBR4 397 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 FOXJ3Q9UPW0 622 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 MRPS7Q9Y2R9 242 aaKnown RBP3.96□□□□□ -1.78
USP25-206ENST00000453553 CSNK1G3Q9Y6M4 447 aa3.96□□□□□ -1.78
USP25-206ENST00000453553 A0A087WZ39 114 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 CCDC169A6NNP5 214 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 MPTX1A8MV57 137 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 K7EQM0 130 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 UGT2B4P06133 528 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 IQCF3P0C7M6 154 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 OTX2P32243 289 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 PTGFRP43088 359 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 PTGER3P43115 390 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 DHPSP49366 369 aaPredicted RBP3.95□□□□□ -1.78
USP25-206ENST00000453553 MFGE8Q08431 387 aaPredicted RBP3.95□□□□□ -1.78
USP25-206ENST00000453553 NECTIN1Q15223 517 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 ANKRD55Q3KP44 614 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 LRRTM1Q86UE6 522 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 CACUL1Q86Y37 369 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 ZCCHC7Q8N3Z6 543 aaKnown RBP3.95□□□□□ -1.78
USP25-206ENST00000453553 OR2T3Q8NH03 318 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 PCED1BQ96HM7 432 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 ZNF607Q96SK3 696 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 IL12RB2Q99665 862 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 MRPL13Q9BYD1 178 aaKnown RBP3.95□□□□□ -1.78
USP25-206ENST00000453553 S100A14Q9HCY8 104 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 RABL2AQ9UBK7 228 aaPredicted RBP3.95□□□□□ -1.78
USP25-206ENST00000453553 P2RX2Q9UBL9 471 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 CTNNA3Q9UI47 895 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 ZNF490Q9ULM2 529 aaPredicted RBP3.95□□□□□ -1.78
USP25-206ENST00000453553 PLCL2Q9UPR0 1127 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 SF3B1O75533 1304 aaKnown RBP eCLIP3.95□□□□□ -1.78
USP25-206ENST00000453553 KIF7Q2M1P5 1343 aa3.95□□□□□ -1.78
USP25-206ENST00000453553 MEX3AA1L020 520 aaKnown RBP3.94□□□□□ -1.78
USP25-206ENST00000453553 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.94□□□□□ -1.78
USP25-206ENST00000453553 SLC1A7O00341 560 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 P2RX6O15547 441 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 GPRIN2O60269 458 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 LRCH4O75427 683 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 RHOBTB1O94844 696 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 MBD3O95983 291 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 LYNP07948 512 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 GLRA1P23415 457 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 DPP4P27487 766 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 GSCP56915 257 aaPredicted RBP3.94□□□□□ -1.78
USP25-206ENST00000453553 NUCB2P80303 420 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 NFATC2Q13469 925 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 TRIP10Q15642 601 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 C3AR1Q16581 482 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 CLPPQ16740 277 aaPredicted RBP3.94□□□□□ -1.78
USP25-206ENST00000453553 CCDC57Q2TAC2 916 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 ATP1A1-AS1Q5TC04 95 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 ASPHD2Q6ICH7 369 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 CATSPERDQ86XM0 798 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 ZNF679Q8IYX0 411 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 STEAP2Q8NFT2 490 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 GIPC3Q8TF64 312 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 RNF139Q8WU17 664 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 TMEM37Q8WXS4 190 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 GTF3AQ92664 365 aaKnown RBP3.94□□□□□ -1.78
USP25-206ENST00000453553 CASP10Q92851 521 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 OMA1Q96E52 524 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 COG3Q96JB2 828 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 AGAP3Q96P47 875 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 VPS35Q96QK1 796 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 TRIM51Q9BSJ1 452 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 NLNQ9BYT8 704 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 UPF3AQ9H1J1 476 aaKnown RBP3.94□□□□□ -1.78
USP25-206ENST00000453553 CXXC4Q9H2H0 198 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 MTHFD2LQ9H903 347 aaPredicted RBP3.94□□□□□ -1.78
USP25-206ENST00000453553 CALHM2Q9HA72 323 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 ATP6V1HQ9UI12 483 aa3.94□□□□□ -1.78
USP25-206ENST00000453553 DDX49Q9Y6V7 483 aaKnown RBP3.94□□□□□ -1.78
USP25-206ENST00000453553 TDRD15B5MCY1 1934 aaKnown RBP3.93□□□□□ -1.78
USP25-206ENST00000453553 CACNA1FO60840 1977 aa3.93□□□□□ -1.78
USP25-206ENST00000453553 C15orf38-AP3S2A0A0A6YYH1 394 aa3.93□□□□□ -1.78
USP25-206ENST00000453553 A0A0J9YWU9 116 aa3.93□□□□□ -1.78
USP25-206ENST00000453553 SHISA7A6NL88 538 aa3.93□□□□□ -1.78
USP25-206ENST00000453553 A8MUI8 341 aa3.93□□□□□ -1.78
USP25-206ENST00000453553 NPIPB9F8W1W9 429 aa3.93□□□□□ -1.78
USP25-206ENST00000453553 ARPC1BO15143 372 aaKnown RBP3.93□□□□□ -1.78
USP25-206ENST00000453553 TSC22D2O75157 780 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms