RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 GOT1L1Q8NHS2 421 aaPredicted RBP10.8□□□□□ -0.68
SCN9A-204ENST00000452182 M1APQ8TC57 530 aa10.8□□□□□ -0.68
SCN9A-204ENST00000452182 SLC2A12Q8TD20 617 aa10.8□□□□□ -0.68
SCN9A-204ENST00000452182 SENP5Q96HI0 755 aaPredicted RBP10.8□□□□□ -0.68
SCN9A-204ENST00000452182 SLC25A23Q9BV35 468 aa10.8□□□□□ -0.68
SCN9A-204ENST00000452182 RMND5AQ9H871 391 aa10.8□□□□□ -0.68
SCN9A-204ENST00000452182 TAS2R9Q9NYW1 312 aa10.8□□□□□ -0.68
SCN9A-204ENST00000452182 NTMQ9P121 344 aa10.8□□□□□ -0.68
SCN9A-204ENST00000452182 PTGFRNQ9P2B2 879 aa10.8□□□□□ -0.68
SCN9A-204ENST00000452182 FBXL4Q9UKA2 621 aa10.8□□□□□ -0.68
SCN9A-204ENST00000452182 POLHQ9Y253 713 aa10.8□□□□□ -0.68
SCN9A-204ENST00000452182 MAN2B2Q9Y2E5 1009 aa10.8□□□□□ -0.68
SCN9A-204ENST00000452182 LAMA5O15230 3695 aa10.8□□□□□ -0.68
SCN9A-204ENST00000452182 URB1O60287 2271 aaKnown RBP10.8□□□□□ -0.68
SCN9A-204ENST00000452182 A8MUA0 341 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 CAPN14A8MX76 684 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 BCAS2O75934 225 aaPredicted RBP10.79□□□□□ -0.68
SCN9A-204ENST00000452182 C6orf47O95873 294 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 CT62P0C5K7 136 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 CAPN3P20807 821 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 S1PR1P21453 382 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 RRADP55042 308 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 SOX8P57073 446 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 HBA1P69905 142 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 HSPB3Q12988 150 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 TLR1Q15399 786 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 LTB4RQ15722 352 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 MAPKAPK3Q16644 382 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 TIGD2Q4W5G0 525 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 COQ5Q5HYK3 327 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 ATP1A1-AS1Q5TC04 95 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 FHL5Q5TD97 284 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 TMEM64Q6YI46 380 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 OR2L13Q8N349 312 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 ADCY4Q8NFM4 1077 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 OR7G1Q8NGA0 311 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 ELP5Q8TE02 316 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 ZNF721Q8TF20 911 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 VPS33AQ96AX1 596 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 ELP4Q96EB1 424 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 VMP1Q96GC9 406 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 ZNF160Q9HCG1 818 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 MMP25Q9NPA2 562 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 SERHLQ9NQF3 203 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 SIRT3Q9NTG7 399 aaPredicted RBP10.79□□□□□ -0.68
SCN9A-204ENST00000452182 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.79□□□□□ -0.681e-7■■■□□ 18.8
SCN9A-204ENST00000452182 ARMCX1Q9P291 453 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 PCDHGB4Q9UN71 923 aa10.79□□□□□ -0.68
SCN9A-204ENST00000452182 ASPDHA6ND91 283 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 BBIP1A8MTZ0 92 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 NR5A2O00482 541 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 PSMG1O95456 288 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 PRKAR1AP10644 381 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 CD1EP15812 388 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 ITPKBP27987 946 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 GPC1P35052 558 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 TRPC1P48995 793 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 PGDP52209 483 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 SLC37A1P57057 533 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 MRPS35P82673 323 aaKnown RBP10.78□□□□□ -0.68
SCN9A-204ENST00000452182 VAC14Q08AM6 782 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 AIMP2Q13155 320 aaKnown RBP10.78□□□□□ -0.68
SCN9A-204ENST00000452182 ZNF267Q14586 743 aaPredicted RBP10.78□□□□□ -0.68
SCN9A-204ENST00000452182 VPS26BQ4G0F5 336 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 TRMT12Q53H54 448 aaKnown RBP10.78□□□□□ -0.68
SCN9A-204ENST00000452182 FAM111BQ6SJ93 734 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 GK5Q6ZS86 529 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 CLECL1Q8IZS7 167 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 CLEC1AQ8NC01 280 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 OR7G2Q8NG99 324 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 OR8K3Q8NH51 312 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 DNAJB8Q8NHS0 232 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 RP9Q8TA86 221 aaKnown RBP10.78□□□□□ -0.68
SCN9A-204ENST00000452182 MOAP1Q96BY2 351 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 ITCHQ96J02 903 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 PANX1Q96RD7 426 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 OR8D2Q9GZM6 311 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 ATP13A2Q9NQ11 1180 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 COPS7AQ9UBW8 275 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 C19orf53Q9UNZ5 99 aaPredicted RBP10.78□□□□□ -0.68
SCN9A-204ENST00000452182 ERVK-11Q9UQG0 969 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 ERVK-19Q9WJR5 959 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 NDUFAF1Q9Y375 327 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 CHD8Q9HCK8 2581 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 IGF2RP11717 2491 aa10.78□□□□□ -0.68
SCN9A-204ENST00000452182 OR6C76A6NM76 312 aa10.77□□□□□ -0.68
SCN9A-204ENST00000452182 HRKO00198 91 aa10.77□□□□□ -0.68
SCN9A-204ENST00000452182 UPK1AO00322 258 aa10.77□□□□□ -0.68
SCN9A-204ENST00000452182 RFXANKO14593 260 aa10.77□□□□□ -0.68
SCN9A-204ENST00000452182 ANGPT2O15123 496 aa10.77□□□□□ -0.68
SCN9A-204ENST00000452182 CBX7O95931 251 aa10.77□□□□□ -0.68
SCN9A-204ENST00000452182 CLPSP04118 112 aa10.77□□□□□ -0.68
SCN9A-204ENST00000452182 SERPINA7P05543 415 aa10.77□□□□□ -0.68
SCN9A-204ENST00000452182 ZCCHC18P0CG32 403 aa10.77□□□□□ -0.68
SCN9A-204ENST00000452182 PRDX6P30041 224 aa10.77□□□□□ -0.68
SCN9A-204ENST00000452182 MC3RP41968 323 aa10.77□□□□□ -0.68
SCN9A-204ENST00000452182 CDK9P50750 372 aaKnown RBP10.77□□□□□ -0.68
SCN9A-204ENST00000452182 CLCN2P51788 898 aa10.77□□□□□ -0.68
SCN9A-204ENST00000452182 BTBD16Q32M84 506 aa10.77□□□□□ -0.68
SCN9A-204ENST00000452182 JMJD6Q6NYC1 403 aaPredicted RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms