RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 SOX18P35713 384 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 PRKAA2P54646 552 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 KCNJ2P63252 427 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 DUSP2Q05923 314 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 MGAT2Q10469 447 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 RPS6KA2Q15349 733 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 GXYLT1Q4G148 440 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 TMEM211Q6ICI0 200 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 TMEM64Q6YI46 380 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 GSPT2Q8IYD1 628 aaKnown RBP11.47□□□□□ -0.57
CPSF4-208ENST00000452047 ZNF295-AS1Q8N0V1 137 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 TAGAPQ8N103 731 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 LRRC25Q8N386 305 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-208ENST00000452047 C1orf52Q8N6N3 182 aaKnown RBP11.47□□□□□ -0.57
CPSF4-208ENST00000452047 FAM13CQ8NE31 585 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 C17orf47Q8NEP4 570 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 OR7G1Q8NGA0 311 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 OR5M9Q8NGP3 310 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 CA5BP1Q8WTZ4 195 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 TM4SF18Q96CE8 201 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 L3HYPDHQ96EM0 354 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 TREX2Q9BQ50 279 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-208ENST00000452047 ENKD1Q9H0I2 346 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 OR10A5Q9H207 317 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 ZFP64Q9NPA5 681 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 COQ3Q9NZJ6 369 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 TNFRSF10DQ9UBN6 386 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 VPS29Q9UBQ0 182 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 BOKQ9UMX3 212 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-208ENST00000452047 DTX4Q9Y2E6 619 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 ARHGAP21Q5T5U3 1957 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 ANKRD33BA6NCL7 494 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 GOLGA6L10A6NI86 522 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 BCKDKO14874 412 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 HCN1O60741 890 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 TRIM3O75382 744 aaPredicted RBP11.46□□□□□ -0.57
CPSF4-208ENST00000452047 LRATO95237 230 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 KRT6AP02538 564 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 KRT6BP04259 564 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 GSTA1P08263 222 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 PYGBP11216 843 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 CHN1P15882 459 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 NT5EP21589 574 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 GPX3P22352 226 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 ACVR2AP27037 513 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 CHRNB4P30926 498 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 KRT6CP48668 564 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 HTR6P50406 440 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 NUP107P57740 925 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 FBXW4P57775 412 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 TRA2BP62995 288 aaKnown RBP11.46□□□□□ -0.57
CPSF4-208ENST00000452047 TFF3Q07654 80 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 CSTF3Q12996 717 aaKnown RBP11.46□□□□□ -0.57
CPSF4-208ENST00000452047 LCP2Q13094 533 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 DUSP8Q13202 625 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 SLC10A1Q14973 349 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 PRICKLE4Q2TBC4 344 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 SH2D5Q6ZV89 423 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 GPRIN3Q6ZVF9 776 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 SLC22A9Q8IVM8 553 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 CNPY4Q8N129 248 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 VWA5B2Q8N398 1253 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 OR5M3Q8NGP4 307 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 CHTF18Q8WVB6 975 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 RND1Q92730 232 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 CTHRC1Q96CG8 243 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 NTNG2Q96CW9 530 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 C11orf24Q96F05 449 aaPredicted RBP11.46□□□□□ -0.57
CPSF4-208ENST00000452047 ZNF681Q96N22 645 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 SPOCK3Q9BQ16 436 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 DOHHQ9BU89 302 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 ACPTQ9BZG2 426 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 GSTO2Q9H4Y5 243 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 NMRK1Q9NWW6 199 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 MAT2BQ9NZL9 334 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 SPRR3Q9UBC9 169 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 ZNF639Q9UID6 485 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 EMCNQ9ULC0 261 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 RNF6Q9Y252 685 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 FAM215AQ9Y5M1 114 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 NPFFR2Q9Y5X5 522 aa11.46□□□□□ -0.57
CPSF4-208ENST00000452047 TRGV5A0A0B4J1U4 118 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 FIGNL2A6NMB9 653 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 ERAL1O75616 437 aaKnown RBP11.45□□□□□ -0.58
CPSF4-208ENST00000452047 CBX7O95931 251 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 IGFBP2P18065 325 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 ABCD3P28288 659 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 FEN1P39748 380 aaKnown RBP11.45□□□□□ -0.58
CPSF4-208ENST00000452047 MAN2A2P49641 1150 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 TMED10P49755 219 aaKnown RBP11.45□□□□□ -0.58
CPSF4-208ENST00000452047 RAE1P78406 368 aaKnown RBP11.45□□□□□ -0.58
CPSF4-208ENST00000452047 PMPCAQ10713 525 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 MAP4K2Q12851 820 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 TBCELQ5QJ74 424 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 C6orf163Q5TEZ5 329 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 HLA-DQA1Q5Y7H0 255 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 BICRALQ6AI39 1079 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 RTL6Q6ICC9 239 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 FAM180BQ6P0A1 224 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 FAM111BQ6SJ93 734 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms