RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 PCDHGB1Q9Y5G3 927 aa15.17■□□□□ 0.02
AP000253.1-201ENST00000449339 SPAG17Q6Q759 2223 aa15.17■□□□□ 0.02
AP000253.1-201ENST00000449339 LAMA1P25391 3075 aa15.17■□□□□ 0.02
AP000253.1-201ENST00000449339 CCDC88CQ9P219 2028 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 C2orf74A8MZ97 194 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 FFAR1O14842 300 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 DNAJB6O75190 326 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 DCNP07585 359 aaKnown RBP15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 ITIH1P19827 911 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 FEN1P39748 380 aaKnown RBP15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 BLKP51451 505 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 LIM2P55344 173 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 EMX1Q04741 257 aaPredicted RBP15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 RGS1Q08116 209 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 NPTX1Q15818 432 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 BHLHB9Q6PI77 547 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 ZNF540Q8NDQ6 660 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 UTP15Q8TED0 518 aaKnown RBP15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 ZFPM2Q8WW38 1151 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 RASSF5Q8WWW0 418 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 GAL3ST3Q96A11 431 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 COL21A1Q96P44 957 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 ZNF556Q9HAH1 456 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 ERVK-18Q9QC07 812 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 SEC14L3Q9UDX4 400 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 KCND3Q9UK17 655 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 PILRAQ9UKJ1 303 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 VCANP13611 3396 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 EML5Q05BV3 1969 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 TRIM64BA6NI03 449 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 OR5K4A6NMS3 321 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 TMX2-CTNND1H3BSU7 103 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 WBP4O75554 376 aaKnown RBP15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 SERPINB7O75635 380 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 SLC35G6P0C7Q6 338 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 NR2F1P10589 423 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 BCKDHBP21953 392 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 PPP2R1BP30154 601 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 KRT20P35900 424 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 KCNJ5P48544 419 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 MAPK10P53779 464 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 FOXD4Q12950 439 aaPredicted RBP15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 TAGAPQ8N103 731 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 SHISA5Q8N114 240 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 APH1BQ8WW43 257 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 TM4SF19Q96DZ7 209 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 HSPA12BQ96MM6 686 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 RHNO1Q9BSD3 238 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 TMEM74BQ9NUR3 256 aa15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 LYARQ9NX58 379 aaKnown RBP15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 WARS2Q9UGM6 360 aaKnown RBP15.16■□□□□ 0.02
AP000253.1-201ENST00000449339 A0A1W2PPW3 197 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 CCNB2O95067 398 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 EIF2S1P05198 315 aaKnown RBP15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 HMGN2P05204 90 aaKnown RBP15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 POU2F1P14859 743 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 CSNK2A2P19784 350 aaPredicted RBP15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 MPIP34949 423 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 GGT2P36268 569 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 KHKP50053 298 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 LASP1Q14847 261 aaKnown RBP15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 FGD3Q5JSP0 725 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 COLEC12Q5KU26 742 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 AP1ARQ63HQ0 302 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 TMEM107Q6UX40 140 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 SPEM1Q8N4L4 309 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 DEFB123Q8N688 67 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 NT5CQ8TCD5 201 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 SFXN5Q8TD22 340 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 LMX1AQ8TE12 382 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 OTUB1Q96FW1 271 aaPredicted RBP15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 ZNF354BQ96LW1 612 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 ALPK1Q96QP1 1244 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 PSD2Q9BQI7 771 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 CHRDQ9H2X0 955 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 RNF6Q9Y252 685 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 MRPS2Q9Y399 296 aaKnown RBP15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 TLR4O00206 839 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 FAM20BO75063 409 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 SEMA7AO75326 666 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 INMTO95050 263 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 CSF2P04141 144 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 FHP07954 510 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 DEFB134Q4QY38 66 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 TCTN3Q6NUS6 607 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 TMEFF1Q8IYR6 380 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 FAM81AQ8TBF8 368 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 RAB2BQ8WUD1 216 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 NELL2Q99435 816 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 YIPF4Q9BSR8 244 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 NMNAT1Q9HAN9 279 aaPredicted RBP15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 GIMAP4Q9NUV9 329 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 PCDHGA10Q9Y5H3 936 aa15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 GPC6Q9Y625 555 aaPredicted RBP15.15■□□□□ 0.02
AP000253.1-201ENST00000449339 H0YGG7 62 aa15.14■□□□□ 0.01
AP000253.1-201ENST00000449339 HCRTR1O43613 425 aa15.14■□□□□ 0.01
AP000253.1-201ENST00000449339 CDK4P11802 303 aa15.14■□□□□ 0.01
AP000253.1-201ENST00000449339 CCNA2P20248 432 aa15.14■□□□□ 0.01
AP000253.1-201ENST00000449339 MAGEA8P43361 318 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms