RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 TAC1P20366 129 aa19.07■□□□□ 0.64
SDC1-205ENST00000447124 IMPDH1P20839 514 aa19.07■□□□□ 0.64
SDC1-205ENST00000447124 ATP5F1P24539 256 aaPredicted RBP19.07■□□□□ 0.64
SDC1-205ENST00000447124 FEN1P39748 380 aaKnown RBP19.07■□□□□ 0.64
SDC1-205ENST00000447124 FBXW4P57775 412 aa19.07■□□□□ 0.64
SDC1-205ENST00000447124 DUSP8Q13202 625 aa19.07■□□□□ 0.64
SDC1-205ENST00000447124 BICRALQ6AI39 1079 aa19.07■□□□□ 0.64
SDC1-205ENST00000447124 ZNF585AQ6P3V2 769 aa19.07■□□□□ 0.64
SDC1-205ENST00000447124 DND1Q8IYX4 353 aaKnown RBP19.07■□□□□ 0.64
SDC1-205ENST00000447124 C1orf52Q8N6N3 182 aaKnown RBP19.07■□□□□ 0.64
SDC1-205ENST00000447124 SIMC1Q8NDZ2 872 aa19.07■□□□□ 0.64
SDC1-205ENST00000447124 RND1Q92730 232 aa19.07■□□□□ 0.64
SDC1-205ENST00000447124 SPOCK3Q9BQ16 436 aa19.07■□□□□ 0.64
SDC1-205ENST00000447124 SPRR3Q9UBC9 169 aa19.07■□□□□ 0.64
SDC1-205ENST00000447124 DTX4Q9Y2E6 619 aa19.07■□□□□ 0.64
SDC1-205ENST00000447124 FAM215AQ9Y5M1 114 aa19.07■□□□□ 0.64
SDC1-205ENST00000447124 NPFFR2Q9Y5X5 522 aa19.07■□□□□ 0.64
SDC1-205ENST00000447124 FREM3P0C091 2139 aa19.07■□□□□ 0.64
SDC1-205ENST00000447124 PHF3Q92576 2039 aaKnown RBP19.07■□□□□ 0.64
SDC1-205ENST00000447124 INTS1Q8N201 2190 aaKnown RBP19.06■□□□□ 0.64
SDC1-205ENST00000447124 C1orf226A1L170 272 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 FOXO6A8MYZ6 492 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 BCKDKO14874 412 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 PYGBP11216 843 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 MAN2A2P49641 1150 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 PRKAA2P54646 552 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 KCNJ2P63252 427 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 MAP4K2Q12851 820 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 PRICKLE4Q2TBC4 344 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 FAM180BQ6P0A1 224 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 GDF7Q7Z4P5 450 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 GSPT2Q8IYD1 628 aaKnown RBP19.06■□□□□ 0.64
SDC1-205ENST00000447124 TAGAPQ8N103 731 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 LRRC25Q8N386 305 aaPredicted RBP19.06■□□□□ 0.64
SDC1-205ENST00000447124 ASB5Q8WWX0 329 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 ZNF681Q96N22 645 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 ZNF382Q96SR6 550 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 TREX2Q9BQ50 279 aaPredicted RBP19.06■□□□□ 0.64
SDC1-205ENST00000447124 LDAHQ9H6V9 325 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 ZNF703Q9H7S9 590 aaPredicted RBP19.06■□□□□ 0.64
SDC1-205ENST00000447124 RYDENQ9NUL5 291 aaKnown RBP19.06■□□□□ 0.64
SDC1-205ENST00000447124 HEY2Q9UBP5 337 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 VPS29Q9UBQ0 182 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 ZNF639Q9UID6 485 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 NCKAP5O14513 1909 aa19.06■□□□□ 0.64
SDC1-205ENST00000447124 POLQO75417 2590 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 TRGV5A0A0B4J1U4 118 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 A0A1W2PPM1 405 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 ANKRD33BA6NCL7 494 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 NKX2-6A6NCS4 301 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 ENO4A6NNW6 628 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 HCN1O60741 890 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 GUCY1B2O75343 617 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 TRIM3O75382 744 aaPredicted RBP19.05■□□□□ 0.64
SDC1-205ENST00000447124 ERAL1O75616 437 aaKnown RBP19.05■□□□□ 0.64
SDC1-205ENST00000447124 TOXO94900 526 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 ACVR2AP27037 513 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 HTR6P50406 440 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 RAE1P78406 368 aaKnown RBP19.05■□□□□ 0.64
SDC1-205ENST00000447124 TFF3Q07654 80 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 RASA2Q15283 850 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 HLA-DQA1Q5Y7H0 255 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 SH2D5Q6ZV89 423 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 LCA5Q86VQ0 697 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 PRR22Q8IZ63 422 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 OR7G1Q8NGA0 311 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 SPPL2AQ8TCT8 520 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 NTNG2Q96CW9 530 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 CNRIP1Q96F85 164 aaPredicted RBP19.05■□□□□ 0.64
SDC1-205ENST00000447124 TTYH2Q9BSA4 534 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 MAT2BQ9NZL9 334 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 FETUBQ9UGM5 382 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 TBK1Q9UHD2 729 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 ACAD8Q9UKU7 415 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 EMCNQ9ULC0 261 aa19.05■□□□□ 0.64
SDC1-205ENST00000447124 BOKQ9UMX3 212 aaPredicted RBP19.05■□□□□ 0.64
SDC1-205ENST00000447124 TACC2O95359 2948 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 GLI4P10075 376 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 CSNK2A2P19784 350 aaPredicted RBP19.04■□□□□ 0.64
SDC1-205ENST00000447124 GPX3P22352 226 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 CHRNB4P30926 498 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 DEKP35659 375 aaKnown RBP19.04■□□□□ 0.64
SDC1-205ENST00000447124 KRTAP10-9P60411 292 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 TRA2BP62995 288 aaKnown RBP19.04■□□□□ 0.64
SDC1-205ENST00000447124 EXOSC7Q15024 291 aaKnown RBP19.04■□□□□ 0.64
SDC1-205ENST00000447124 TRMT12Q53H54 448 aaKnown RBP19.04■□□□□ 0.64
SDC1-205ENST00000447124 FNDC7Q5VTL7 733 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 DESI1Q6ICB0 168 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 GPRIN3Q6ZVF9 776 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 ADCY4Q8NFM4 1077 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 METTL6Q8TCB7 284 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 ACMSDQ8TDX5 336 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 DIO2Q92813 273 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 CTHRC1Q96CG8 243 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 APIPQ96GX9 242 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 LURAP1Q96LR2 239 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 JSRP1Q96MG2 331 aaPredicted RBP19.04■□□□□ 0.64
SDC1-205ENST00000447124 DOHHQ9BU89 302 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 BRINP2Q9C0B6 783 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 NXF5Q9H1B4 397 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms