RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	SLC38A5	Q8WUX1	472 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	GPA33	Q99795	319 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	GABARAPL1	Q9H0R8	117 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	OSGEPL1	Q9H4B0	414 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	REEP4	Q9H6H4	257 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	MRPL17	Q9NRX2	175 aa	Known RBP	11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	NKIRAS2	Q9NYR9	191 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	GLTP	Q9NZD2	209 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312		Q9Y3F1	56 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312		A0A0B4J293	547 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	SHOX	O15266	292 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	CSTF2	P33240	577 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	TMEM115	Q12893	351 aa	Predicted RBP	11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	MTAP	Q13126	283 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	GPNMB	Q14956	572 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	FAM27D1	Q5T7N8	215 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	UNC5D	Q6UXZ4	953 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	SYT9	Q86SS6	491 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	CCDC190	Q86UF4	302 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	LHFPL5	Q8TAF8	219 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	RNF31	Q96EP0	1072 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	URB1	O60287	2271 aa	Known RBP	11.89	□□□□□ -0.51
DDR1-238	ENST00000446312	PLXND1	Q9Y4D7	1925 aa		11.89	□□□□□ -0.51
DDR1-238	ENST00000446312		A0A1W2PQ45	241 aa	Predicted RBP	11.88	□□□□□ -0.51
DDR1-238	ENST00000446312		A0A1W2PQY0	241 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312		A0A1W2PRG6	482 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	ISM1	B1AKI9	464 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	PRMT3	O60678	531 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	TOX	O94900	526 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	NR2F1	P10589	423 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	KIR2DL3	P43628	341 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	EPHB3	P54753	998 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	HYAL4	Q2M3T9	481 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	TRIM40	Q6P9F5	258 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	OR8J2	Q8NGG1	315 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	OR10Z1	Q8NGY1	313 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	11.88	□□□□□ -0.51	5e-39	■■■■■ 49.2
DDR1-238	ENST00000446312	SLC7A13	Q8TCU3	470 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	FCGR1B	Q92637	280 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	PIGK	Q92643	395 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	FBXW5	Q969U6	566 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	ZG16B	Q96DA0	208 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	TOE1	Q96GM8	510 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	NELL2	Q99435	816 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	SEC22C	Q9BRL7	303 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	NLN	Q9BYT8	704 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	PLA2G12A	Q9BZM1	189 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	WSB2	Q9NYS7	404 aa	Predicted RBP	11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	MRPL15	Q9P015	296 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	TAC3	Q9UHF0	121 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	DYRK1B	Q9Y463	629 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	TRBV23OR9-2	A0A075B6M9	112 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	FAM240B	A0A1B0GVZ2	78 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	CPSF4L	A6NMK7	179 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	MAGEB4	O15481	346 aa	Predicted RBP	11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	DNAJB5	O75953	348 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	IFNA14	P01570	189 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	EPHX1	P07099	455 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	PCGF2	P35227	344 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	WAS	P42768	502 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	CCT3	P49368	545 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	STXBP1	P61764	594 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	RBBP4	Q09028	425 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	ZNF763	Q0D2J5	394 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	CDC20	Q12834	499 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	MRPL28	Q13084	256 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	ZNF284	Q2VY69	593 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	CRB2	Q5IJ48	1285 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	NDUFAF5	Q5TEU4	345 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	TRIQK	Q629K1	86 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	RAET1G	Q6H3X3	334 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	SLC30A6	Q6NXT4	461 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	LINC00518	Q8N0U6	118 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	DNAJC5G	Q8N7S2	189 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	PCSK9	Q8NBP7	692 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	C19orf18	Q8NEA5	215 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	OR5AR1	Q8NGP9	310 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	SLC6A18	Q96N87	628 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	CMAHP	Q9Y471	501 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	TRBV5-4	A0A0C4DH59	114 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	LINC01387	J3KSC0	135 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	SLC2A10	O95528	541 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	SEMG1	P04279	462 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	CSF3	P09919	207 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	OLR1	P78380	273 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	CSTF1	Q05048	431 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	PRKCD	Q05655	676 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	BTN1A1	Q13410	526 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	FLYWCH1	Q4VC44	716 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	FAM209B	Q5JX69	171 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	PLET1	Q6UQ28	207 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	NOXA1	Q86UR1	476 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	NPAS4	Q8IUM7	802 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	SFTPA1	Q8IWL2	248 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	KIAA1958	Q8N8K9	716 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	GPR32P1	Q8NGA4	272 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	OR8H1	Q8NGG4	311 aa		11.88	□□□□□ -0.51
DDR1-238	ENST00000446312	FANK1	Q8TC84	345 aa		11.88	□□□□□ -0.51

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