RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 CHAC2Q8WUX2 184 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 MYOCQ99972 504 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 TINAGL1Q9GZM7 467 aaPredicted RBP4.92□□□□□ -1.62
SCN11A-202ENST00000444237 SRRQ9GZT4 340 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 DDX31Q9H8H2 851 aaKnown RBP4.92□□□□□ -1.62
SCN11A-202ENST00000444237 TMX2Q9Y320 296 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 MYH11P35749 1972 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ARNTLO00327 626 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 HBP1O60381 514 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 TSPAN3O60637 253 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ADAM11O75078 769 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 SOX14O95416 240 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 PRAMEF12O95522 483 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 SCGB1D1O95968 90 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 CTPS1P17812 591 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 S100GP29377 79 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 RFC3P40938 356 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 PNLIPRP1P54315 467 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ACTBP60709 375 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ACTG1P63261 375 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 BAATQ14032 418 aaPredicted RBP4.92□□□□□ -1.62
SCN11A-202ENST00000444237 TTLL4Q14679 1199 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 AMHR2Q16671 573 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 FAM26DQ5JW98 314 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 NXNL2Q5VZ03 156 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ADAM5Q6NVV9 412 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 DPY19L2P1Q6NXN4 242 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 TMEM88Q6PEY1 159 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 SLC16A9Q7RTY1 509 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 SLC44A3Q8N4M1 653 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 KIAA1958Q8N8K9 716 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 SUMF2Q8NBJ7 301 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 SHKBP1Q8TBC3 707 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 TANKQ92844 425 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 FATE1Q969F0 183 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 CPNE4Q96A23 557 aaPredicted RBP4.92□□□□□ -1.62
SCN11A-202ENST00000444237 KIAA1191Q96A73 305 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 INTS12Q96CB8 462 aaKnown RBP4.92□□□□□ -1.62
SCN11A-202ENST00000444237 SPATA33Q96N06 139 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 LINC00052Q96N35 136 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ZNF599Q96NL3 588 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ZNF382Q96SR6 550 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 DDOQ99489 341 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 TMEM43Q9BTV4 400 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 FAIM2Q9BWQ8 316 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 TCEAL2Q9H3H9 227 aaPredicted RBP4.92□□□□□ -1.62
SCN11A-202ENST00000444237 CREBZFQ9NS37 354 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 PPP1R14DQ9NXH3 145 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 POMT2Q9UKY4 750 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ATG4BQ9Y4P1 393 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 PCDHA9Q9Y5H5 950 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 MYH7P12883 1935 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ACOT7O00154 380 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ACKR2O00590 384 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 OR2T1O43869 369 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 AOC2O75106 756 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ATG13O75143 517 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 CILPO75339 1184 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 BEST1O76090 585 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 IFNA1P01562 189 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 FGF4P08620 206 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 CSF1P09603 554 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 TACSTD2P09758 323 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ADRA1BP35368 520 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 LHX1P48742 406 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 RBP2P50120 134 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 MAT1AQ00266 395 aaKnown RBP4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ZNF177Q13360 481 aaPredicted RBP4.92□□□□□ -1.62
SCN11A-202ENST00000444237 GINS1Q14691 196 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ZNF124Q15973 351 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 SMN1Q16637 294 aaKnown RBP4.92□□□□□ -1.62
SCN11A-202ENST00000444237 UNC50Q53HI1 259 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 NCBP2-AS2Q69YL0 99 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 XAF1Q6GPH4 301 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 RGMBQ6NW40 437 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 TSSK4Q6SA08 328 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 AGMOQ6ZNB7 445 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 USP51Q70EK9 711 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 LARP4Q71RC2 724 aaKnown RBP eCLIP4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ZNF627Q7L945 461 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 PDZD3Q86UT5 571 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 COMTD1Q86VU5 262 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 NAXDQ8IW45 347 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ARFGAP1Q8N6T3 406 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 RHEBL1Q8TAI7 183 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 CASTOR1Q8WTX7 329 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 UCN3Q969E3 161 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 TMEM159Q96B96 161 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 SLCO4A1Q96BD0 722 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 FCRL5Q96RD9 977 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 KCNA7Q96RP8 456 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 GAS2L1Q99501 681 aaPredicted RBP4.92□□□□□ -1.62
SCN11A-202ENST00000444237 ELF4Q99607 663 aaPredicted RBP4.92□□□□□ -1.62
SCN11A-202ENST00000444237 EDEM2Q9BV94 578 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 DERL2Q9GZP9 239 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 PORCNQ9H237 461 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 HRH4Q9H3N8 390 aa4.92□□□□□ -1.62
SCN11A-202ENST00000444237 DNAJC15Q9Y5T4 150 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms