RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 RSL24D1Q9UHA3 163 aaKnown RBP11.08□□□□□ -0.64
SMAD3-202ENST00000439724 COLQQ9Y215 455 aaPredicted RBP11.08□□□□□ -0.64
SMAD3-202ENST00000439724 NAALAD2Q9Y3Q0 740 aa11.08□□□□□ -0.64
SMAD3-202ENST00000439724 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 A0A0G2JPF8 293 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 HNRNPCL2B2RXH8 293 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 HNRNPCL3B7ZW38 293 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 ZNF701M0R085 212 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-202ENST00000439724 TLR4O00206 839 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 KIF1CO43896 1103 aaKnown RBP11.07□□□□□ -0.64
SMAD3-202ENST00000439724 GALR3O60755 368 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-202ENST00000439724 CCNB2O95067 398 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 CHRM4P08173 479 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 IFI6P09912 130 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 HNRNPCL4P0DMR1 293 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 AGXTP21549 392 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 XKP51811 444 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 MAZP56270 477 aaKnown RBP11.07□□□□□ -0.64
SMAD3-202ENST00000439724 LTB4RQ15722 352 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 COLEC12Q5KU26 742 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 B3GNT6Q6ZMB0 384 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 CAMKK1Q8N5S9 505 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 DEFB119Q8N690 84 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 C19orf47Q8N9M1 422 aaKnown RBP11.07□□□□□ -0.64
SMAD3-202ENST00000439724 NMD3Q96D46 503 aaKnown RBP11.07□□□□□ -0.64
SMAD3-202ENST00000439724 GIMAP5Q96F15 307 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 CNDP2Q96KP4 475 aaKnown RBP11.07□□□□□ -0.64
SMAD3-202ENST00000439724 MS4A4EQ96PG1 132 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 OR7D2Q96RA2 312 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 CDX2Q99626 313 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-202ENST00000439724 ACTRT3Q9BYD9 372 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 IL21RQ9HBE5 538 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 VCX3AQ9NNX9 186 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 CALML5Q9NZT1 146 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 ENOPH1Q9UHY7 261 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 ACAD8Q9UKU7 415 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 LIPT1Q9Y234 373 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 HCN4Q9Y3Q4 1203 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 SPACA6W5XKT8 324 aa11.07□□□□□ -0.64
SMAD3-202ENST00000439724 CEP192Q8TEP8 1941 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 DSPPQ9NZW4 1301 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 FFAR1O14842 300 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 PCDH17O14917 1159 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 CASC3O15234 703 aaKnown RBP11.06□□□□□ -0.64
SMAD3-202ENST00000439724 DNAJB6O75190 326 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 ANGPTL1O95841 491 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 EIF2S1P05198 315 aaKnown RBP11.06□□□□□ -0.64
SMAD3-202ENST00000439724 CPMP14384 443 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 ST6GAL1P15907 406 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 TYRP1P17643 537 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 CBLP22681 906 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 EPHA2P29317 976 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 RPP38P78345 283 aaKnown RBP11.06□□□□□ -0.64
SMAD3-202ENST00000439724 SIM1P81133 766 aaPredicted RBP11.06□□□□□ -0.64
SMAD3-202ENST00000439724 PMS2P3Q13401 168 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 GANABQ14697 944 aaKnown RBP11.06□□□□□ -0.64
SMAD3-202ENST00000439724 MAD2L1BPQ15013 274 aaPredicted RBP11.06□□□□□ -0.64
SMAD3-202ENST00000439724 TCTN3Q6NUS6 607 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 MFSD12Q6NUT3 480 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 ZNF438Q7Z4V0 828 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 C17orf82Q86X59 251 aaPredicted RBP11.06□□□□□ -0.64
SMAD3-202ENST00000439724 SIX5Q8N196 739 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 OR2L13Q8N349 312 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 PARP8Q8N3A8 854 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 GALNT15Q8N3T1 639 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 SDR16C5Q8N3Y7 309 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 ARL14Q8N4G2 192 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 OR7G2Q8NG99 324 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 OR52J3Q8NH60 311 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 CNIH3Q8TBE1 160 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 LMX1AQ8TE12 382 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 PHF10Q8WUB8 498 aaKnown RBP11.06□□□□□ -0.64
SMAD3-202ENST00000439724 KAT2AQ92830 837 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 CLDN23Q96B33 292 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 C16orf58Q96GQ5 468 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 TRNT1Q96Q11 434 aaKnown RBP11.06□□□□□ -0.64
SMAD3-202ENST00000439724 ALPK1Q96QP1 1244 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 CCDC3Q9BQI4 270 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 YIPF4Q9BSR8 244 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.06□□□□□ -0.64
SMAD3-202ENST00000439724 RLIMQ9NVW2 624 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 GIN1Q9NXP7 522 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 PTGFRNQ9P2B2 879 aa11.06□□□□□ -0.64
SMAD3-202ENST00000439724 ZNF860A6NHJ4 632 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 DUXAA6NLW8 204 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 CYR61O00622 381 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 UBXN7O94888 489 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 SLITRK5O94991 958 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 OXSR1O95747 527 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-202ENST00000439724 AGR2O95994 175 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 HTR1AP08908 422 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 PORP16435 677 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-202ENST00000439724 CDH3P22223 829 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 GGT2P36268 569 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 PEX19P40855 299 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 CAPZBP47756 277 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 VSX2P58304 361 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-202ENST00000439724 NXPH1P58417 271 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 SMIM11AP58511 58 aa11.05□□□□□ -0.64
SMAD3-202ENST00000439724 OLR1P78380 273 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms