RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 SMIM30A4D0T7 59 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 ANKDD1BA6NHY2 528 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 KBTBD13C9JR72 458 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 SELENOFO60613 162 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 SRPX2O60687 465 aaPredicted RBP2.44□□□□□ -2.02
CLK1-204ENST00000432425 ZNF254O75437 659 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 PALMO75781 387 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 PTBP3O95758 552 aaKnown RBP2.44□□□□□ -2.02
CLK1-204ENST00000432425 CALCAP01258 141 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 RLN1P04808 185 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 OR9G9P0C7N8 305 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 CCNA2P20248 432 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 GDI1P31150 447 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 CA8P35219 290 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 SOAT1P35610 550 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 SOX6P35712 828 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 ALDH3B1P43353 468 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 IFNAR2P48551 515 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 CTAG1AP78358 180 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 GSTO1P78417 241 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 CUL2Q13617 745 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 SYCP1Q15431 976 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 CCDC57Q2TAC2 916 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 NHSL2Q5HYW2 709 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 GLRA4Q5JXX5 417 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 CCDC122Q5T0U0 273 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 METTL11BQ5VVY1 283 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 LYPLAL1Q5VWZ2 237 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 CASC4Q6P4E1 433 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 RFWD3Q6PCD5 774 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 CENPQQ7L2Z9 268 aaPredicted RBP2.44□□□□□ -2.02
CLK1-204ENST00000432425 SYCP3Q8IZU3 236 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 SAMD12Q8N8I0 201 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 AGR3Q8TD06 166 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.44□□□□□ -2.02
CLK1-204ENST00000432425 SGF29Q96ES7 293 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 PPP1R16AQ96I34 528 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 MCCC1Q96RQ3 725 aaPredicted RBP2.44□□□□□ -2.02
CLK1-204ENST00000432425 ATG101Q9BSB4 218 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 KRT23Q9C075 422 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 LSG1Q9H089 658 aaKnown RBP2.44□□□□□ -2.02
CLK1-204ENST00000432425 C1orf21Q9H246 121 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 NCOR1P1Q9H4R4 102 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 TRPV5Q9NQA5 729 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 QPCTLQ9NXS2 382 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 ZNF319Q9P2F9 582 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 APPL1Q9UKG1 709 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 LIPT1Q9Y234 373 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 KDRP35968 1356 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 ZNF724A8MTY0 619 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 ZNF487B1APH4 448 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 F8VZ95 297 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 POLR3GO15318 223 aaPredicted RBP2.44□□□□□ -2.02
CLK1-204ENST00000432425 NME6O75414 186 aaPredicted RBP2.44□□□□□ -2.02
CLK1-204ENST00000432425 RHBDL1O75783 438 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 REC8O95072 547 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 ZFYP08048 801 aaPredicted RBP2.44□□□□□ -2.02
CLK1-204ENST00000432425 ZNF19P17023 458 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 DNAJB1P25685 340 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 RPA1P27694 616 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 ID1P41134 155 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 MTIF2P46199 727 aaKnown RBP2.44□□□□□ -2.02
CLK1-204ENST00000432425 HMGCS2P54868 508 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 CBX3Q13185 183 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 ABRAXAS2Q15018 415 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 LTB4RQ15722 352 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 PM20D1Q6GTS8 502 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 TMEM270Q6UE05 265 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 ZNF600Q6ZNG1 722 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 PEX5LQ8IYB4 626 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 SLC7A5P1Q8MH63 180 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 ZNF444Q8N0Y2 327 aaPredicted RBP2.44□□□□□ -2.02
CLK1-204ENST00000432425 KIAA0895Q8NCT3 520 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 BBOF1Q8ND07 529 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 ZNRF1Q8ND25 227 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 SPXQ9BT56 116 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 ZBP1Q9H171 429 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 GLT8D2Q9H1C3 349 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 GLRX2Q9NS18 164 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 AATFQ9NY61 560 aaKnown RBP eCLIP2.44□□□□□ -2.02
CLK1-204ENST00000432425 CYP39A1Q9NYL5 469 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 TRAF3IP3Q9Y228 551 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 TMED7Q9Y3B3 224 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 ETV7Q9Y603 341 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 TEX264Q9Y6I9 313 aa2.44□□□□□ -2.02
CLK1-204ENST00000432425 ATP8B3O60423 1300 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 TTC41PQ6P2S7 1318 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 WDR19Q8NEZ3 1342 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 COL16A1Q07092 1604 aaPredicted RBP2.43□□□□□ -2.02
CLK1-204ENST00000432425 CLRN2A0PK11 232 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 CCDC169A6NNP5 214 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 FAM220BPB1ANY3 271 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 LETM1O95202 739 aaPredicted RBP2.43□□□□□ -2.02
CLK1-204ENST00000432425 TRIM16O95361 564 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 CHRNA3P32297 505 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 ACAA2P42765 397 aaKnown RBP2.43□□□□□ -2.02
CLK1-204ENST00000432425 KCNJ1P48048 391 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 FHITP49789 147 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 ETV1P50549 477 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 CASP9P55211 416 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms