RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 ESAMQ96AP7 390 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 ASB3Q9Y575 518 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.78■□□□□ 0.122e-6■■□□□ 11.5
RIF1-204ENST00000430328 MEIS3P2A8K0S8 358 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 ADCYAP1R1P41586 468 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 CASP6P55212 293 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 CNKSR3Q6P9H4 555 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 C19orf35Q6ZS72 473 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 IRF2BP2Q7Z5L9 587 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.78■□□□□ 0.121e-9■■■■□ 21.7
RIF1-204ENST00000430328 SLC22A14Q9Y267 594 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 A0A0U1RQJ8 604 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 MANSC4A6NHS7 340 aaPredicted RBP15.77■□□□□ 0.12
RIF1-204ENST00000430328 SLC31A2O15432 143 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 PRKACGP22612 351 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 PYCR1P32322 319 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 ETV1P50549 477 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 IRF9Q00978 393 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 SLC7A5P1Q8MH63 180 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 ACBD7Q8N6N7 88 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 NANPQ8TBE9 248 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 RNF208Q9H0X6 261 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 SARDHQ9UL12 918 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 RPH3ALQ9UNE2 315 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 CCL22O00626 93 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 SPATA31D3P0C874 917 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 TMEM225BP0DP42 221 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 HOXD12P35452 270 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 TMEM198Q66K66 360 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 SPATA31D4Q6ZUB0 917 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 MCHR1Q99705 422 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 MICU1Q9BPX6 476 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 GINS3Q9BRX5 216 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 PINK1Q9BXM7 581 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 NMNAT2Q9BZQ4 307 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 SACM1LQ9NTJ5 587 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 RHCGQ9UBD6 479 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 SERTAD3Q9UJW9 196 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 ASTN1O14525 1302 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 A0A1W2PQL4 384 aaPredicted RBP15.77■□□□□ 0.12
RIF1-204ENST00000430328 ZNF736B4DX44 427 aaPredicted RBP15.77■□□□□ 0.12
RIF1-204ENST00000430328 NDUFV2P19404 249 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 PCK2Q16822 640 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 ZNF100Q8IYN0 542 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 TMPRSS5Q9H3S3 457 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 BCAS2O75934 225 aaPredicted RBP15.77■□□□□ 0.12
RIF1-204ENST00000430328 HLA-DOBP13765 273 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 ZNF43P17038 809 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 CRYBB1P53674 252 aaPredicted RBP15.77■□□□□ 0.12
RIF1-204ENST00000430328 ADGRF1Q5T601 910 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 RBMS3Q6XE24 437 aaKnown RBP15.77■□□□□ 0.12
RIF1-204ENST00000430328 GPR155Q7Z3F1 870 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 HDHD5Q9BXW7 423 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 OR2AG1Q9H205 316 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 SH3BGRL2Q9UJC5 107 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 ASB4Q9Y574 426 aa15.77■□□□□ 0.12
RIF1-204ENST00000430328 NAP1L6A6NFF2 107 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 FAAHO00519 579 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 SOCS2O14508 198 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 TRAF3IP2O43734 574 aaPredicted RBP15.77■□□□□ 0.11
RIF1-204ENST00000430328 AOC1P19801 751 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 TNFSF9P41273 254 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 WDR20Q8TBZ3 569 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 SMPDL3AQ92484 453 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 TOMM40LQ969M1 308 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 NKX1-2Q9UD57 310 aaPredicted RBP15.77■□□□□ 0.11
RIF1-204ENST00000430328 FANCGO15287 622 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 FHP07954 510 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 OR6C2Q9NZP2 312 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 RCCD1A6NED2 376 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 UNC119BA6NIH7 251 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 WNT9AO14904 365 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 LCN10Q6JVE6 187 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 XYLT1Q86Y38 959 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 SYT14Q8NB59 555 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 PLPP5Q8NEB5 264 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 OR1F2PQ96R84 312 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 ARHGAP9Q9BRR9 750 aa15.77■□□□□ 0.11
RIF1-204ENST00000430328 A0A087WZY1 265 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 HTRA2O43464 458 aaPredicted RBP15.76■□□□□ 0.11
RIF1-204ENST00000430328 HBE1P02100 147 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 SMIM10L2AP0DMW4 78 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 SMIM10L2BP0DMW5 78 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 NUDT1P36639 197 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 OR1E2P47887 323 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 YIF1BQ5BJH7 314 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 LYSMD3Q7Z3D4 306 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 ZNRF4Q8WWF5 429 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 PLD4Q96BZ4 506 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 RAB39BQ96DA2 213 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 SDCBP2Q9H190 292 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 DLGAP4Q9Y2H0 992 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 HTR3BO95264 441 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 TXNDC12O95881 172 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 KIAA0907Q7Z7F0 614 aaPredicted RBP15.76■□□□□ 0.11
RIF1-204ENST00000430328 OR9A4Q8NGU2 314 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 OR56B4Q8NH76 319 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 TLCD1Q96CP7 247 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 ST6GALNAC5Q9BVH7 336 aa15.76■□□□□ 0.11
RIF1-204ENST00000430328 FOXO6A8MYZ6 492 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms