RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 MFFQ9GZY8 342 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 OR10A4Q9H209 315 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 ASB8Q9H765 288 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 GTF2A1LQ9UNN4 478 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 KCNK7Q9Y2U2 307 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 TRIOBPQ9H2D6 2365 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 BEST1O76090 585 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 CYB5AP00167 134 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 SCG5P05408 212 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 ACPPP15309 386 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 MGMTP16455 207 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 C4orf46Q504U0 113 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 LDB1Q86U70 411 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 ZNF366Q8N895 744 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 ZNF300Q96RE9 604 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 KCNJ16Q9NPI9 418 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 SDK1Q7Z5N4 2213 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 KCNK2O95069 426 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 FUT4P22083 530 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 CDH5P33151 784 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 MC3RP41968 323 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 NUDT6P53370 316 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 SNRPGP62308 76 aaKnown RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 SLC7A9P82251 487 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 EMX1Q04741 257 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 ARMC12Q5T9G4 340 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 VN1R5Q7Z5H4 357 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 PPP1R3BQ86XI6 285 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 SHKBP1Q8TBC3 707 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 CLEC4DQ8WXI8 215 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 SLX1AQ9BQ83 275 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 COLEC11Q9BWP8 271 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 OR52A5Q9H2C5 316 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 MRPS30Q9NP92 439 aaKnown RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 VSX1Q9NZR4 365 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 UBR3Q6ZT12 1888 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 KAT7O95251 611 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 ADORA3P0DMS8 318 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 ALG1LQ6GMV1 187 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 RDH10Q8IZV5 341 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 RIT1Q92963 219 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 ZNF559Q9BR84 538 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 NUDT16L1Q9BRJ7 211 aaKnown RBP7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 BPIFA1Q9NP55 256 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 TCAF2A6NFQ2 919 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 HRO43593 1189 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 GABRB3P28472 473 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 CLDN20P56880 219 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 SLC14A2Q15849 920 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 CGB2Q6NT52 195 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 ESRP1Q6NXG1 681 aaKnown RBP7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 FBXL18Q96ME1 805 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 FAM83CQ9BQN1 747 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 PCDHGA7Q9Y5G6 932 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 TMEM200CA6NKL6 621 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 PIP5K1BO14986 540 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 CIDEAO60543 219 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 WNT4P56705 351 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 POLR2LP62875 67 aaKnown RBP7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 CLCQ05315 142 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 BCL2L1Q07817 233 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 ACSM1Q08AH1 577 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 SIX1Q15475 284 aaPredicted RBP7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 SLC35G1Q2M3R5 365 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 FAM162BQ5T6X4 162 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 MSANTD2Q6P1R3 559 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 WACQ9BTA9 647 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 CDADC1Q9BWV3 514 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 BCAS3Q9H6U6 928 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 POLMQ9NP87 494 aaPredicted RBP7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 ELF5Q9UKW6 265 aaPredicted RBP7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 TIMM22Q9Y584 194 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 C9JVG2 144 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 FLRT2O43155 660 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 EPORP19235 508 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 TBPP20226 339 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 MAGEB1P43366 347 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 ATXN1P54253 815 aaKnown RBP7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 EPHA5P54756 1037 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 SEC61A1P61619 476 aaKnown RBP7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 INCA1Q0VD86 236 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 MFSD10Q14728 455 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 GPR33Q49SQ1 333 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 SNX33Q8WV41 574 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 GGHQ92820 318 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 EDAQ92838 391 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 CNPPD1Q9BV87 410 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 NENFQ9UMX5 172 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 C2orf92A0A1B0GVN3 265 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 A0A1W2PQL4 384 aaPredicted RBP7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 C20orf202A1L168 122 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 CXorf65A6NEN9 183 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 PLSCR1O15162 318 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 ALDOAP04075 364 aaKnown RBP7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 PTPRAP18433 802 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 CHATP28329 748 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 WNT3AP56704 352 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 MBTD1Q05BQ5 628 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 PXDC1Q5TGL8 231 aa7.2□□□□□ -1.26
SYNPO2-202ENST00000429713 CNIH2Q6PI25 160 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms