RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 B3GAT2Q9NPZ5 323 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 CTPS2Q9NRF8 586 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 TSPAN6O43657 245 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 KLK1P06870 262 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 ELAVL4P26378 380 aaKnown RBP13.58□□□□□ -0.24
MSH5-206ENST00000423982 MLLT3P42568 568 aaPredicted RBP13.58□□□□□ -0.24
MSH5-206ENST00000423982 SPINT3P49223 89 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 CTSCP53634 463 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 RBBP4Q09028 425 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 ZNF763Q0D2J5 394 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 GPR19Q15760 415 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 BTBD16Q32M84 506 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 SIGIRRQ6IA17 410 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 TCTN3Q6NUS6 607 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 TRIM40Q6P9F5 258 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 VITQ6UXI7 678 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 CASP12Q6UXS9 341 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 ELMOD2Q8IZ81 293 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 ZNF740Q8NDX6 193 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.58□□□□□ -0.24
MSH5-206ENST00000423982 DEDD2Q8WXF8 326 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 GATAD2BQ8WXI9 593 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 KATNB1Q9BVA0 655 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 BHLHE41Q9C0J9 482 aaPredicted RBP13.58□□□□□ -0.24
MSH5-206ENST00000423982 ABCG4Q9H172 646 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 TMEM38AQ9H6F2 299 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 C5AR2Q9P296 337 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 DKK3Q9UBP4 350 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 TMCC3Q9ULS5 477 aa13.58□□□□□ -0.24
MSH5-206ENST00000423982 TRAPPC2P0DI81 140 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 TRAPPC2BP0DI82 140 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 ARAFP10398 606 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 ALAS2P22557 587 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.57□□□□□ -0.24
MSH5-206ENST00000423982 PLEKHS1Q5SXH7 462 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 Q6ZVL8 140 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 COMTD1Q86VU5 262 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 OXR1Q8N573 874 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 DTX3Q8N9I9 347 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 CHST14Q8NCH0 376 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 OR52I1Q8NGK6 324 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 GRPEL2Q8TAA5 225 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 MSLNLQ96KJ4 702 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 POLR2J3Q9H1A7 115 aaKnown RBP13.57□□□□□ -0.24
MSH5-206ENST00000423982 S1PR5Q9H228 398 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 SUV39H2Q9H5I1 410 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 CXorf36Q9H7Y0 433 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 LOC102723532A0A0G2JNH3 316 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 A8MVJ9 347 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 HPGDSO60760 199 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 GPR37L1O60883 481 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 FCARP24071 287 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 SNRPGP62308 76 aaKnown RBP13.57□□□□□ -0.24
MSH5-206ENST00000423982 MLLT11Q13015 90 aaPredicted RBP13.57□□□□□ -0.24
MSH5-206ENST00000423982 TARDBPQ13148 414 aaKnown RBP eCLIP13.57□□□□□ -0.24
MSH5-206ENST00000423982 SP140Q13342 867 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 PIN1Q13526 163 aaPredicted RBP13.57□□□□□ -0.24
MSH5-206ENST00000423982 HEPACAMQ14CZ8 416 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 NCF4Q15080 339 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 SPIN4Q56A73 249 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 PLET1Q6UQ28 207 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 USP45Q70EL2 814 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 HORMAD2Q8N7B1 307 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 GOT1L1Q8NHS2 421 aaPredicted RBP13.57□□□□□ -0.24
MSH5-206ENST00000423982 SUN5Q8TC36 379 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 ZFAND1Q8TCF1 268 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 C16orf78Q8WTQ4 265 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 APOBEC4Q8WW27 367 aaKnown RBP13.57□□□□□ -0.24
MSH5-206ENST00000423982 UPRTQ96BW1 309 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 SLC6A16Q9GZN6 736 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 FAM83DQ9H4H8 585 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 MTG2Q9H4K7 406 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 BRF2Q9HAW0 419 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 ATP6V1HQ9UI12 483 aa13.57□□□□□ -0.24
MSH5-206ENST00000423982 A0A1W2PRB8 838 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 UGDHO60701 494 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 GSTM1P09488 218 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 ADH5P11766 374 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 SOX18P35713 384 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 IL12RB1P42701 662 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 SLC6A11P48066 632 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 RGS19P49795 217 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 GZMKP49863 264 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 PCDH1Q08174 1060 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 CRTC2Q53ET0 693 aaPredicted RBP13.56□□□□□ -0.24
MSH5-206ENST00000423982 DDI2Q5TDH0 399 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 LAMTOR1Q6IAA8 161 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 TMEM184AQ6ZMB5 413 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 GDPGP1Q6ZNW5 385 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 DPY19L3Q6ZPD9 716 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 HSD11B1LQ7Z5J1 315 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 PROKR2Q8NFJ6 384 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 FIBINQ8TAL6 211 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 SLC7A13Q8TCU3 470 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 SLC38A5Q8WUX1 472 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 ASZ1Q8WWH4 475 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 OTUB1Q96FW1 271 aaPredicted RBP13.56□□□□□ -0.24
MSH5-206ENST00000423982 LYSMD1Q96S90 227 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 HDHD5Q9BXW7 423 aa13.56□□□□□ -0.24
MSH5-206ENST00000423982 GALNT9Q9HCQ5 603 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms