RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 ZNF730Q6ZMV8 503 aa13.12□□□□□ -0.31
CHEK2-210ENST00000416671 COMMD7Q86VX2 200 aa13.12□□□□□ -0.31
CHEK2-210ENST00000416671 C12orf40Q86WS4 652 aa13.12□□□□□ -0.31
CHEK2-210ENST00000416671 GHDCQ8N2G8 530 aa13.12□□□□□ -0.31
CHEK2-210ENST00000416671 ASB11Q8WXH4 323 aa13.12□□□□□ -0.31
CHEK2-210ENST00000416671 PHF21AQ96BD5 680 aa13.12□□□□□ -0.31
CHEK2-210ENST00000416671 HIST1H2AHQ96KK5 128 aa13.12□□□□□ -0.31
CHEK2-210ENST00000416671 PIP5K1AQ99755 562 aa13.12□□□□□ -0.31
CHEK2-210ENST00000416671 HIST1H2AJQ99878 128 aa13.12□□□□□ -0.31
CHEK2-210ENST00000416671 C19orf43Q9BQ61 176 aa13.12□□□□□ -0.31
CHEK2-210ENST00000416671 H2AFJQ9BTM1 129 aa13.12□□□□□ -0.31
CHEK2-210ENST00000416671 MED18Q9BUE0 208 aa13.12□□□□□ -0.31
CHEK2-210ENST00000416671 DUSP26Q9BV47 211 aa13.12□□□□□ -0.31
CHEK2-210ENST00000416671 SLC12A9Q9BXP2 914 aa13.12□□□□□ -0.31
CHEK2-210ENST00000416671 ZNF224Q9NZL3 707 aa13.12□□□□□ -0.31
CHEK2-210ENST00000416671 RPL36Q9Y3U8 105 aaKnown RBP13.12□□□□□ -0.31
CHEK2-210ENST00000416671 KCNE1BA0A087WTH5 132 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 PRAMEF25A6NGN4 478 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 ATP6V1G2-DDX39BF2Z307 99 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 SGTAO43765 313 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 PCDH7O60245 1069 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 SH3BGRLO75368 114 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 MTRF1O75570 445 aaKnown RBP13.11□□□□□ -0.31
CHEK2-210ENST00000416671 GASTP01350 101 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 CHRM5P08912 532 aaPredicted RBP13.11□□□□□ -0.31
CHEK2-210ENST00000416671 CBSLP0DN79 551 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 TIMP2P16035 220 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 CBSP35520 551 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 PREPP48147 710 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 SNTA1Q13424 505 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 GANABQ14697 944 aaKnown RBP13.11□□□□□ -0.31
CHEK2-210ENST00000416671 GGTA1PQ4G0N0 100 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 FLYWCH1Q4VC44 716 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 PAQR6Q6TCH4 344 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 USP30Q70CQ3 517 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 PMEPA1Q969W9 287 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 TMEM43Q9BTV4 400 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 KATNB1Q9BVA0 655 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 MTIF3Q9H2K0 278 aaKnown RBP13.11□□□□□ -0.31
CHEK2-210ENST00000416671 PIGUQ9H490 435 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 B3GAT2Q9NPZ5 323 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 MGAT4AQ9UM21 535 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 C1orf226A1L170 272 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 A8MUA0 341 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 ISM1B1AKI9 464 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 NPIPB8E9PQR5 432 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 TSPAN4O14817 238 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 RAF1P04049 648 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 PBLDP30039 288 aaPredicted RBP13.11□□□□□ -0.31
CHEK2-210ENST00000416671 VIPR1P32241 457 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 CTSCP53634 463 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 PTPN5P54829 565 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 GPM6BQ13491 265 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 GALEQ14376 348 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 POU4F3Q15319 338 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 SF1Q15637 639 aaKnown RBP13.11□□□□□ -0.31
CHEK2-210ENST00000416671 AANATQ16613 207 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 CCSMST1Q4G0I0 132 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 CYP27C1Q4G0S4 372 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 BICRALQ6AI39 1079 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 METAP1DQ6UB28 335 aaPredicted RBP13.11□□□□□ -0.31
CHEK2-210ENST00000416671 ANGPTL8Q6UXH0 198 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 DTX3Q8N9I9 347 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 CREB3L1Q96BA8 519 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 SOSTQ9BQB4 213 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 WRAP53Q9BUR4 548 aaKnown RBP13.11□□□□□ -0.31
CHEK2-210ENST00000416671 RANBP3Q9H6Z4 567 aaPredicted RBP13.11□□□□□ -0.31
CHEK2-210ENST00000416671 NMNAT1Q9HAN9 279 aaPredicted RBP13.11□□□□□ -0.31
CHEK2-210ENST00000416671 UCKL1Q9NWZ5 548 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 PHF11Q9UIL8 331 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 CDH10Q9Y6N8 788 aa13.11□□□□□ -0.31
CHEK2-210ENST00000416671 C5orf67F2Z3F1 127 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 RFXAPO00287 272 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 SERPINI2O75830 405 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 TPOP07202 933 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 CPEP16870 476 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 DDCP20711 480 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 CRATP43155 626 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 LIMS1P48059 325 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 HMGA2P52926 109 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 EPHA5P54756 1037 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 ZNF284Q2VY69 593 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 KLHL12Q53G59 568 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 RNLSQ5VYX0 342 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 BRAT1Q6PJG6 821 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 FOLH1BQ9HBA9 442 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 ZDHHC4Q9NPG8 344 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 ANTXRLA6NF34 631 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 SLC9A3R1O14745 358 aaPredicted RBP13.1□□□□□ -0.31
CHEK2-210ENST00000416671 TSPAN6O43657 245 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 HPGDSO60760 199 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 XPAP23025 273 aaPredicted RBP13.1□□□□□ -0.31
CHEK2-210ENST00000416671 FEN1P39748 380 aaKnown RBP13.1□□□□□ -0.31
CHEK2-210ENST00000416671 VIPR2P41587 438 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 XCR1P46094 333 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 ZNF91Q05481 1191 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 KLHL22Q53GT1 634 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 TMEM201Q5SNT2 666 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 TMIGD1Q6UXZ0 262 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 C16orf62Q7Z3J2 963 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms